RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 MTRRQ9UBK8 725 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 FXYD6-FXYD2A0A087WZ82 144 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 IRGMA1A4Y4 181 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 PROSCO94903 275 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 RBL1P28749 1068 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 S100GP29377 79 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 HOXD12P35452 270 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 MNDAP41218 407 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 MMP13P45452 471 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 RGS19P49795 217 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 TCEAL5Q5H9L2 206 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 USPL1Q5W0Q7 1092 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 AADACL2Q6P093 401 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 RNF44Q7L0R7 432 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 CLNKQ7Z7G1 428 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 SLC41A1Q8IVJ1 513 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 FITM2Q8N6M3 262 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 ETNPPLQ8TBG4 499 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 TRPM4Q8TD43 1214 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 FXYD6Q9H0Q3 95 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 FAM105AQ9NUU6 356 aa8.69□□□□□ -1.02
ATXN3-216ENST00000545170 ASB14A6NK59 587 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 LYPLA1O75608 230 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 OXSR1O95747 527 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 ALDH1B1P30837 517 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 VWA5B1Q5TIE3 1220 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SMIM5Q71RC9 77 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SGMS1Q86VZ5 419 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SYT12Q8IV01 421 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SLC7A5P1Q8MH63 180 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 HERC2P3Q9BVR0 1158 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SENP6Q9GZR1 1112 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PDGFCQ9NRA1 345 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PTBP2Q9UKA9 531 aaKnown RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PCDHA3Q9Y5H8 950 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 MSH4O15457 936 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 TPH1P17752 444 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 STOMP27105 288 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 MTAPQ13126 283 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CUL2Q13617 745 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 RAPSNQ13702 412 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 POU6F1Q14863 301 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 TMEM132DQ14C87 1099 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 LEMD2Q8NC56 503 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 ATL1Q8WXF7 558 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CEP295NLQ96MC4 621 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 NT5C1AQ9BXI3 368 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SEMA4BQ9NPR2 832 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SCUBE2Q9NQ36 999 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 KCTD5Q9NXV2 234 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PDE10AQ9Y233 779 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 ASXL2Q76L83 1435 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 A2MP01023 1474 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 TCOF1Q13428 1488 aaKnown RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 DHX15O43143 795 aaKnown RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 MYL3P08590 195 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 RPS3P23396 243 aaKnown RBP eCLIP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CBX5P45973 191 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 RBP5P82980 135 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CSTF1Q05048 431 aaKnown RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 EPHA7Q15375 998 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 GK5Q6ZS86 529 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 ARCQ7LC44 396 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 GALNTL5Q7Z4T8 443 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CD300LFQ8TDQ1 290 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PTCD2Q8WV60 388 aaKnown RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PMM1Q92871 262 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 C8orf37Q96NL8 207 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 FCRL4Q96PJ5 515 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CLPBQ9H078 707 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 ATXN3LQ9H3M9 355 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 KAT8Q9H7Z6 458 aaKnown RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 ELL3Q9HB65 397 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 HIF3AQ9Y2N7 669 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PTPRTO14522 1441 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 OR10H3O60404 316 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CTSKP43235 329 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SLC7A2P52569 658 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SLC18A2Q05940 514 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CTC1Q2NKJ3 1217 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 KCNV1Q6PIU1 500 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SRFBP1Q8NEF9 429 aaKnown RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 ZNF471Q9BX82 626 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 OSBPL7Q9BZF2 842 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 DNAJC18Q9H819 358 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PLK2Q9NYY3 685 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CCNL1Q9UK58 526 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 DNPEPQ9ULA0 475 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SLC2A2P11168 524 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 PORP16435 677 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 GPD2P43304 727 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 RPS9P46781 194 aaKnown RBP8.68□□□□□ -1.02
ATXN3-216ENST00000545170 SMARCB1Q12824 385 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 TBRG1Q3YBR2 411 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CDKL4Q5MAI5 379 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 LINGO2Q7L985 606 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 GPR65Q8IYL9 337 aa8.68□□□□□ -1.02
ATXN3-216ENST00000545170 CBR4Q8N4T8 237 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms