RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 CINPQ9BW66 212 aaPredicted RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 C1QTNF2Q9BXJ5 285 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 SLC13A1Q9BZW2 595 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 SLC39A8Q9C0K1 460 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 SP110Q9HB58 689 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 USP29Q9HBJ7 922 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 TAS2R14Q9NYV8 317 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 NLGN3Q9NZ94 848 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 NCKIPSDQ9NZQ3 722 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 SPASTQ9UBP0 616 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 DKK3Q9UBP4 350 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 LUC7L2Q9Y383 392 aaKnown RBP7.25□□□□□ -1.25
NUP43-206ENST00000543637 CSNK1G3Q9Y6M4 447 aa7.25□□□□□ -1.25
NUP43-206ENST00000543637 POM121BA6NF01 834 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 H3BRJ5 948 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 RNF103O00237 685 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 SCAMP1O15126 338 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 RRP8O43159 456 aaKnown RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 AQP9O43315 295 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 PIAS2O75928 621 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 NEBLO76041 1014 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 CSF2P04141 144 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ANXA6P08133 673 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 TIMP2P16035 220 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ERCC2P18074 760 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 SERPINA4P29622 427 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 SSR1P43307 286 aaKnown RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 CSNK1DP48730 415 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ACADVLP49748 655 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 FANCCQ00597 558 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 IL10RBQ08334 325 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 NSUN2Q08J23 767 aaKnown RBP eCLIP7.24□□□□□ -1.25
NUP43-206ENST00000543637 RFTN1Q14699 578 aaPredicted RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 LRRC14Q15048 493 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 HADHQ16836 314 aaKnown RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 UGP2Q16851 508 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 KLHL40Q2TBA0 621 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 SKOR2Q2VWA4 1001 aaPredicted RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 TMEM52BQ4KMG9 183 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ZNF542PQ5EBM4 170 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 HES3Q5TGS1 186 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ESRP1Q6NXG1 681 aaKnown RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 ZCCHC8Q6NZY4 707 aaKnown RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 BRAT1Q6PJG6 821 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 KDM7AQ6ZMT4 941 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 GCNT7Q6ZNI0 430 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 RFX8Q6ZV50 586 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 KANSL1Q7Z3B3 1105 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ZNF571Q7Z3V5 609 aaPredicted RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 SRLQ86TD4 932 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 PARGQ86W56 976 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 NDUFAF2Q8N183 169 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 CACTIN-AS1Q8N1I8 211 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 SLC25A45Q8N413 288 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 TPCN2Q8NHX9 752 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 LMX1AQ8TE12 382 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 FNIP1Q8TF40 1166 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 TSC1Q92574 1164 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 NXPE2Q96DL1 559 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 CELF6Q96J87 481 aaKnown RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 TUBGCP5Q96RT8 1024 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ANP32EQ9BTT0 268 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 WRAP53Q9BUR4 548 aaKnown RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 SNRNP25Q9BV90 132 aaKnown RBP7.24□□□□□ -1.25
NUP43-206ENST00000543637 NRSN2Q9GZP1 204 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ISCUQ9H1K1 167 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 HSD3B7Q9H2F3 369 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 ATP13A3Q9H7F0 1226 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 HAUS2Q9NVX0 235 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 GPATCH2LQ9NWQ4 482 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 DKK4Q9UBT3 224 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 IP6K2Q9UHH9 426 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 SALL4Q9UJQ4 1053 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 LHX6Q9UPM6 363 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 CLCA2Q9UQC9 943 aa7.24□□□□□ -1.25
NUP43-206ENST00000543637 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.24□□□□□ -1.25
NUP43-206ENST00000543637 CACNA1AO00555 2505 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.23□□□□□ -1.25
NUP43-206ENST00000543637 A0A1W2PQ67 120 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 A0A1W2PQJ5 194 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 SYCE3A1L190 88 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 CPED1A4D0V7 1026 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 J3KR12 359 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 MYO1FO00160 1098 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 TAF4O00268 1085 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 TRIM38O00635 465 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 TPP1O14773 563 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 AREL1O15033 823 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 ATMINO43313 823 aaPredicted RBP7.23□□□□□ -1.25
NUP43-206ENST00000543637 PRAMEF11O60813 436 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 MT-CO3P00414 261 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 TNFP01375 233 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 SERPING1P05155 500 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 TPM1P09493 284 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 ALPIP09923 528 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 CKMT1AP12532 417 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 KRT10P13645 584 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 MIPP30301 263 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 SERPINB6P35237 376 aa7.23□□□□□ -1.25
NUP43-206ENST00000543637 ACTN2P35609 894 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms