RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ANKRD42Q8N9B4 389 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 IFT43Q96FT9 208 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 ABHD8Q96I13 439 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 APOPT1Q96IL0 206 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 SERAC1Q96JX3 654 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 LMLNQ96KR4 655 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 TRIB3Q96RU7 358 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 C2orf49Q9BVC5 232 aaPredicted RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 SFXN1Q9H9B4 322 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 SCUBE2Q9NQ36 999 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 TREX1Q9NSU2 369 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 DZANK1Q9NVP4 752 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 TBC1D14Q9P2M4 693 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 LHX3Q9UBR4 397 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 ACTL7AQ9Y615 435 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 TTC24A2A3L6 582 aaPredicted RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 HMX2A2RU54 273 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 TM9SF1O15321 606 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 SNAP91O60641 907 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 SPAG7O75391 227 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 GJB3O75712 270 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 PRAMEF12O95522 483 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 PENKP01210 267 aaPredicted RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 PAMP19021 973 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 RGRP47804 291 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 NSUN2Q08J23 767 aaKnown RBP eCLIP9.42□□□□□ -0.9
GNE-206ENST00000543356 LAMB3Q13751 1172 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 KCNC3Q14003 757 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 TEDDM1Q5T9Z0 273 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 NLRP9Q7RTR0 991 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 METTL3Q86U44 580 aaKnown RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 CNTN4Q8IWV2 1026 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 SLC25A41Q8N5S1 370 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 ZNF557Q8N988 423 aaPredicted RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 TTC16Q8NEE8 873 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 SMG7Q92540 1137 aaKnown RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 ACDQ96AP0 544 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 OTUB2Q96DC9 234 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 GDF15Q99988 308 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 NOD2Q9HC29 1040 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 CD248Q9HCU0 757 aa9.42□□□□□ -0.9
GNE-206ENST00000543356 C20orf96Q9NUD7 363 aaPredicted RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 MRPS23Q9Y3D9 190 aaKnown RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
GNE-206ENST00000543356 GMNCA6NCL1 334 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 SIN3BO75182 1162 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 SKAP2O75563 359 aaPredicted RBP9.41□□□□□ -0.9
GNE-206ENST00000543356 RFPL1O75677 317 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 NDST3O95803 873 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 ALADP13716 330 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 CA4P22748 312 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 NRIP1P48552 1158 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 NEK3P51956 506 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 CSE1LP55060 971 aaKnown RBP9.41□□□□□ -0.9
GNE-206ENST00000543356 LMAN2Q12907 356 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 RETSATQ6NUM9 610 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 TPGS1Q6ZTW0 290 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 MGARPQ8TDB4 240 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 GDPD5Q8WTR4 605 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 CKAP2Q8WWK9 683 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 PEX13Q92968 403 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 RBBP8Q99708 897 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 CERS4Q9HA82 394 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 PIDD1Q9HB75 910 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 TXNDC16Q9P2K2 825 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 SLC17A6Q9P2U8 582 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 PSAT1Q9Y617 370 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 MROH6A6NGR9 719 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 ASMTLO95671 621 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 PYGBP11216 843 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 RPA3P35244 121 aaPredicted RBP9.41□□□□□ -0.9
GNE-206ENST00000543356 ARCN1P48444 511 aaKnown RBP9.41□□□□□ -0.9
GNE-206ENST00000543356 NUMBP49757 651 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 PPARDQ03181 441 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 BMPR2Q13873 1038 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 SEPT6Q14141 434 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 HSP90AA5PQ58FG0 334 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 TSTD2Q5T7W7 516 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 LINGO4Q6UY18 593 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 KDELC2Q7Z4H8 507 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 TRIM74Q86UV6 250 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 TRIM73Q86UV7 250 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 APCDD1Q8J025 514 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 VN1R2Q8NFZ6 395 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 ACMSDQ8TDX5 336 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 DYDC1Q8WWB3 177 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 ISL2Q96A47 359 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 ZSWIM3Q96MP5 696 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 ZNF778Q96MU6 729 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 MCMBPQ9BTE3 642 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 TDRD1Q9BXT4 1180 aaKnown RBP9.41□□□□□ -0.9
GNE-206ENST00000543356 IL1RAPL1Q9NZN1 696 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 MARK1Q9P0L2 795 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 CPSF2Q9P2I0 782 aaKnown RBP9.41□□□□□ -0.9
GNE-206ENST00000543356 RIMKLBQ9ULI2 386 aa9.41□□□□□ -0.9
GNE-206ENST00000543356 SLC9A3R1O14745 358 aaPredicted RBP9.4□□□□□ -0.9
GNE-206ENST00000543356 FAM107AO95990 144 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 ITGA2BP08514 1039 aa9.4□□□□□ -0.9
GNE-206ENST00000543356 CD70P32970 193 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms