RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 MTCL1Q9Y4B5 1905 aaKnown RBP5.71□□□□□ -1.5
CPSF7-220ENST00000541963 TRANK1O15050 2925 aa5.71□□□□□ -1.5
CPSF7-220ENST00000541963 PRUNE2Q8WUY3 3088 aa5.71□□□□□ -1.5
CPSF7-220ENST00000541963 GOLGA8IPA6NC78 632 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 GOLGA8JA6NMD2 632 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 ZNF785A8K8V0 405 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CAPN14A8MX76 684 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 GOLGA6L6A8MZA4 724 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 KPNA7A9QM74 516 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 TISP43B9A030 160 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 BTN3A1O00481 513 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CYB561D2O14569 222 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 ZNF197O14709 1029 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 KPNA5O15131 536 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CALUO43852 315 aaPredicted RBP5.7□□□□□ -1.5
CPSF7-220ENST00000541963 EXOC3O60645 756 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 HUS1O60921 280 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 AGFG2O95081 481 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 SMC2O95347 1197 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 MATN4O95460 622 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CHEK2O96017 543 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 RPN1P04843 607 aaKnown RBP5.7□□□□□ -1.5
CPSF7-220ENST00000541963 KRT19P08727 400 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 WEE2P0C1S8 567 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 SETSIPP0DME0 302 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 PTPN2P17706 415 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 TNNI1P19237 187 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 HK1P19367 917 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 AARSP49588 968 aaKnown RBP eCLIP5.7□□□□□ -1.5
CPSF7-220ENST00000541963 NDUFA8P51970 172 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 AP3M2P53677 418 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 POU6F2P78424 691 aaPredicted RBP5.7□□□□□ -1.5
CPSF7-220ENST00000541963 SMARCB1Q12824 385 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 FOXL1Q12952 345 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 MYO1EQ12965 1108 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 PLD1Q13393 1074 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 RAB32Q13637 225 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 MYBPC2Q14324 1141 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 LMBRD2Q68DH5 695 aaPredicted RBP5.7□□□□□ -1.5
CPSF7-220ENST00000541963 KRBA2Q6ZNG9 492 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 GPRIN1Q7Z2K8 1008 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 C1QL4Q86Z23 238 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 NELFCDQ8IXH7 590 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 C12orf56Q8IXR9 622 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 UBALD2Q8IYN6 164 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 DCP1BQ8IZD4 617 aaKnown RBP5.7□□□□□ -1.5
CPSF7-220ENST00000541963 FUKQ8N0W3 1084 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CCDC33Q8N5R6 958 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CSGALNACT2Q8N6G5 542 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 LRRC52Q8N7C0 313 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 XXYLT1Q8NBI6 393 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 OR10H5Q8NGA6 315 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 SCFD1Q8WVM8 642 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 EDAQ92838 391 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 SCAMP4Q969E2 229 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 SAAL1Q96ER3 474 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 SENP8Q96LD8 212 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 KCNC2Q96PR1 638 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CBWD1Q9BRT8 395 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 LSM14BQ9BX40 385 aaKnown RBP5.7□□□□□ -1.5
CPSF7-220ENST00000541963 TRIM54Q9BYV2 358 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 EPHX3Q9H6B9 360 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CYP4F11Q9HBI6 524 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 PARD6AQ9NPB6 346 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 SERHLQ9NQF3 203 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 AGPAT3Q9NRZ7 376 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 RMND1Q9NWS8 449 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 IGSF9Q9P2J2 1179 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 CPNE7Q9UBL6 633 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 FBXL5Q9UKA1 691 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 ITGA11Q9UKX5 1188 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 PADI4Q9UM07 663 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 AGAP1Q9UPQ3 857 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 MED16Q9Y2X0 877 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 PLEKHM1Q9Y4G2 1056 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 UNC80Q8N2C7 3258 aa5.7□□□□□ -1.5
CPSF7-220ENST00000541963 PDCD11Q14690 1871 aaKnown RBP5.69□□□□□ -1.5
CPSF7-220ENST00000541963 CDHR4A6H8M9 788 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 GOLGA6L3A6NEY3 463 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 OTOL1A6NHN0 477 aaPredicted RBP5.69□□□□□ -1.5
CPSF7-220ENST00000541963 C2CD4DB7Z1M9 353 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 RASA4BC9J798 803 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 PDXKO00764 312 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 CLIC2O15247 247 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 CCL16O15467 120 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 ADAM12O43184 909 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 TGFB1I1O43294 461 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 RASA4O43374 803 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 KLRC4O43908 158 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 RFPL2O75678 378 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 RHOBTB3O94955 611 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 ITGB3P05106 788 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 FAM163BP0C2L3 166 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 CASP1P29466 404 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 STT3AP46977 705 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 LHX1P48742 406 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 TUFMP49411 452 aaKnown RBP5.69□□□□□ -1.5
CPSF7-220ENST00000541963 PRIM2P49643 509 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 CYP2J2P51589 502 aa5.69□□□□□ -1.5
CPSF7-220ENST00000541963 ZNF135P52742 658 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms