RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CELF6Q96J87 481 aaKnown RBP22.48■■□□□ 1.19
SCARB1-206ENST00000539320 RALYQ9UKM9 306 aaKnown RBP22.48■■□□□ 1.19
SCARB1-206ENST00000539320 SPTY2D1-AS1A0A0U1RR47 76 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 ARHGAP42A6NI28 874 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 H3BM21 787 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 INSIG1O15503 277 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 PRAMEF11O60813 436 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 MYBL1P10243 752 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 NME1P15531 152 aaKnown RBP22.47■■□□□ 1.19
SCARB1-206ENST00000539320 MIPP30301 263 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 TPM4P67936 248 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 CYP4F3Q08477 520 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 NR1I3Q14994 352 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 CYTH1Q15438 398 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 FIGNQ5HY92 759 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 RFX8Q6ZV50 586 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 CXorf40AQ8TE69 158 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 CPEB1Q9BZB8 566 aaKnown RBP22.47■■□□□ 1.19
SCARB1-206ENST00000539320 CAAP1Q9H8G2 361 aa22.47■■□□□ 1.19
SCARB1-206ENST00000539320 IPO11Q9UI26 975 aaKnown RBP22.47■■□□□ 1.19
SCARB1-206ENST00000539320 DAPK3O43293 454 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 LRCH4O75427 683 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 PIGNO95427 931 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 SKILP12757 684 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 XPAP23025 273 aaPredicted RBP22.46■■□□□ 1.19
SCARB1-206ENST00000539320 PFN3P60673 137 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 PDE1CQ14123 709 aaPredicted RBP22.46■■□□□ 1.19
SCARB1-206ENST00000539320 TDRD12Q587J7 1177 aaKnown RBP22.46■■□□□ 1.19
SCARB1-206ENST00000539320 CYP4V2Q6ZWL3 525 aaPredicted RBP22.46■■□□□ 1.19
SCARB1-206ENST00000539320 PSTKQ8IV42 348 aaKnown RBP22.46■■□□□ 1.19
SCARB1-206ENST00000539320 NXPE2Q96DL1 559 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 C1QTNF7Q9BXJ2 289 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 CBX8Q9HC52 389 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 NLGN3Q9NZ94 848 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 LHX6Q9UPM6 363 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 RAXQ9Y2V3 346 aa22.46■■□□□ 1.19
SCARB1-206ENST00000539320 TSPAN11A1L157 253 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 SYCE3A1L190 88 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 NEMP2A6NFY4 417 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 J3KR12 359 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 TM7SF2O76062 418 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 CSF2P04141 144 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 GIMD1P0DJR0 217 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 TIMP2P16035 220 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 IGFALSP35858 605 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 SUOXP51687 545 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 ZNF135P52742 658 aaPredicted RBP22.45■■□□□ 1.18
SCARB1-206ENST00000539320 GRM3Q14832 879 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 KLHL40Q2TBA0 621 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 PPP6R3Q5H9R7 873 aaPredicted RBP22.45■■□□□ 1.18
SCARB1-206ENST00000539320 TPRG1LQ5T0D9 272 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 KDM7AQ6ZMT4 941 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 VPS36Q86VN1 386 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 ZNF548Q8NEK5 533 aaPredicted RBP22.45■■□□□ 1.18
SCARB1-206ENST00000539320 RFFLQ8WZ73 363 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 SLC39A8Q9C0K1 460 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 SP110Q9HB58 689 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 MRPL47Q9HD33 250 aaKnown RBP22.45■■□□□ 1.18
SCARB1-206ENST00000539320 MYO1AQ9UBC5 1043 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 GPSM3Q9Y4H4 160 aa22.45■■□□□ 1.18
SCARB1-206ENST00000539320 SCAMP1O15126 338 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 MMP20O60882 483 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 ERCC2P18074 760 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 PAPOLAP51003 745 aaKnown RBP22.44■■□□□ 1.18
SCARB1-206ENST00000539320 FANCCQ00597 558 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 ELP6Q0PNE2 266 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 AFMIDQ63HM1 303 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 LUZP1Q86V48 1076 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 ARHGAP12Q8IWW6 846 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 WRAP53Q9BUR4 548 aaKnown RBP22.44■■□□□ 1.18
SCARB1-206ENST00000539320 DUSP23Q9BVJ7 150 aa22.44■■□□□ 1.18
SCARB1-206ENST00000539320 CKMT1AP12532 417 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 ITIH2P19823 946 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 E2F1Q01094 437 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 INSM1Q01101 510 aaPredicted RBP22.43■■□□□ 1.18
SCARB1-206ENST00000539320 TARDBPQ13148 414 aaKnown RBP eCLIP22.43■■□□□ 1.182e-6■■■■■ 38.5
SCARB1-206ENST00000539320 TMEM52BQ4KMG9 183 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 CFAP58Q5T655 872 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 NPWQ8N729 165 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 HCAR2Q8TDS4 363 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 CENPTQ96BT3 561 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 APOLD1Q96LR9 279 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 TUBGCP5Q96RT8 1024 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 CINPQ9BW66 212 aaPredicted RBP22.43■■□□□ 1.18
SCARB1-206ENST00000539320 ISCUQ9H1K1 167 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 SUV39H2Q9H5I1 410 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 EVA1BQ9NVM1 165 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 CELSR3Q9NYQ7 3312 aa22.43■■□□□ 1.18
SCARB1-206ENST00000539320 DSPP15924 2871 aaKnown RBP22.43■■□□□ 1.18
SCARB1-206ENST00000539320 A0A1W2PQJ5 194 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 K7ESM1 405 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 DFFAO00273 331 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 NEBLO76041 1014 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 JUNDP17535 347 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 PCK1P35558 622 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 PBX1P40424 430 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 THOP1P52888 689 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 EIF2B5Q13144 721 aaKnown RBP22.42■■□□□ 1.18
SCARB1-206ENST00000539320 DPYSQ14117 519 aa22.42■■□□□ 1.18
SCARB1-206ENST00000539320 HGSNATQ68CP4 663 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms