RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 CENPTQ96BT3 561 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 EDEM3Q9BZQ6 932 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 DHX35Q9H5Z1 703 aaKnown RBP14.67□□□□□ -0.06
COPS7A-209ENST00000538753 LRRC19Q9H756 370 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 CAAP1Q9H8G2 361 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 GPATCH2LQ9NWQ4 482 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 NLGN3Q9NZ94 848 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 LHX3Q9UBR4 397 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 UBA2Q9UBT2 640 aaPredicted RBP14.67□□□□□ -0.06
COPS7A-209ENST00000538753 LHX6Q9UPM6 363 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 RAXQ9Y2V3 346 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 ZFC3H1O60293 1989 aaKnown RBP14.67□□□□□ -0.06
COPS7A-209ENST00000538753 ATRXP46100 2492 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 ATMQ13315 3056 aa14.67□□□□□ -0.06
COPS7A-209ENST00000538753 EEF2KO00418 725 aaKnown RBP14.66□□□□□ -0.06
COPS7A-209ENST00000538753 SCAMP1O15126 338 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 PRAMEF11O60813 436 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 RNF8O76064 485 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 CSF2P04141 144 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 ALPPL2P10696 532 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 CKMT1AP12532 417 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 NME1P15531 152 aaKnown RBP14.66□□□□□ -0.06
COPS7A-209ENST00000538753 TIMP2P16035 220 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 PFN3P60673 137 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 DAB2P98082 770 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 E2F1Q01094 437 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 KLHL30Q0D2K2 578 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 TARDBPQ13148 414 aaKnown RBP eCLIP14.66□□□□□ -0.06
COPS7A-209ENST00000538753 PDE1CQ14123 709 aaPredicted RBP14.66□□□□□ -0.06
COPS7A-209ENST00000538753 GRM3Q14832 879 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 NR1I3Q14994 352 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 CA9Q16790 459 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 LRRC73Q5JTD7 316 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 PARGQ86W56 976 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 CACTIN-AS1Q8N1I8 211 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 HCAR2Q8TDS4 363 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 PEBP4Q96S96 227 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 FUCA2Q9BTY2 467 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 SNRNP25Q9BV90 132 aaKnown RBP14.66□□□□□ -0.06
COPS7A-209ENST00000538753 PDFQ9HBH1 243 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 CNOT8Q9UFF9 292 aaKnown RBP14.66□□□□□ -0.06
COPS7A-209ENST00000538753 PCSK1NQ9UHG2 260 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 IPO11Q9UI26 975 aaKnown RBP14.66□□□□□ -0.06
COPS7A-209ENST00000538753 KLF15Q9UIH9 416 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 SMG1Q96Q15 3661 aaKnown RBP14.66□□□□□ -0.06
COPS7A-209ENST00000538753 KALRNO60229 2985 aa14.66□□□□□ -0.06
COPS7A-209ENST00000538753 ARHGAP42A6NI28 874 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 H3BM21 787 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 J3KR12 359 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 DDX3XO00571 662 aaKnown RBP eCLIP14.65□□□□□ -0.064e-6■■■■■ 27.3
COPS7A-209ENST00000538753 INSIG1O15503 277 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 PRPSAP2O60256 369 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 MMP20O60882 483 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 TM7SF2O76062 418 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 SERPINC1P01008 464 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 SKILP12757 684 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 MIPP30301 263 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 PAPOLAP51003 745 aaKnown RBP14.65□□□□□ -0.06
COPS7A-209ENST00000538753 SUOXP51687 545 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 INSM1Q01101 510 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-209ENST00000538753 TPRG1LQ5T0D9 272 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 CYP4V2Q6ZWL3 525 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-209ENST00000538753 PSTKQ8IV42 348 aaKnown RBP14.65□□□□□ -0.06
COPS7A-209ENST00000538753 FAM181AQ8N9Y4 354 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 ZNF548Q8NEK5 533 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-209ENST00000538753 CXorf40AQ8TE69 158 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 NXPE2Q96DL1 559 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 CELF6Q96J87 481 aaKnown RBP14.65□□□□□ -0.06
COPS7A-209ENST00000538753 EXOC2Q96KP1 924 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 APOLD1Q96LR9 279 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 KCTD15Q96SI1 283 aaPredicted RBP14.65□□□□□ -0.06
COPS7A-209ENST00000538753 NCAPGQ9BPX3 1015 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 DUSP23Q9BVJ7 150 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 TRIM7Q9C029 511 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 SLC39A8Q9C0K1 460 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 CSNK1G3Q9Y6M4 447 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 SCINQ9Y6U3 715 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 PTPRQQ9UMZ3 2332 aa14.65□□□□□ -0.06
COPS7A-209ENST00000538753 K7ESM1 405 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 DAPK3O43293 454 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 NEBLO76041 1014 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 PIGNO95427 931 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 MYBL1P10243 752 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 ITIH2P19823 946 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 XPAP23025 273 aaPredicted RBP14.64□□□□□ -0.07
COPS7A-209ENST00000538753 THOP1P52888 689 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 YPEL5P62699 121 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 ELP6Q0PNE2 266 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 PTK2BQ14289 1009 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 TMEM52BQ4KMG9 183 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 PPP6R3Q5H9R7 873 aaPredicted RBP14.64□□□□□ -0.07
COPS7A-209ENST00000538753 FIGNQ5HY92 759 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 AFMIDQ63HM1 303 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 C19orf48Q6RUI8 117 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 RFX8Q6ZV50 586 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 VPS36Q86VN1 386 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 ZNF653Q96CK0 615 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 TRIM11Q96F44 468 aa14.64□□□□□ -0.07
COPS7A-209ENST00000538753 ZNF641Q96N77 438 aaPredicted RBP14.64□□□□□ -0.07
COPS7A-209ENST00000538753 WRAP53Q9BUR4 548 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms