RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 INPPL1O15357 1258 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 HNRNPRO43390 633 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 GUCY1B2O75343 617 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 USP1O94782 785 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 ALBP02768 609 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 GSNP06396 782 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 CCDC159P0C7I6 412 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 ALAS2P22557 587 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 GRK2P25098 689 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 RPL22P35268 128 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 CCT8P50990 548 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 GJA9P57773 515 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 ACSM2AQ08AH3 577 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 CTBP1Q13363 440 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 PARP15Q460N3 678 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 FBXW10Q5XX13 1052 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 ACSM2BQ68CK6 577 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 FAAH2Q6GMR7 532 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 CAPRIN2Q6IMN6 1127 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 PMF1Q6P1K2 205 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 BNC2Q6ZN30 1099 aaPredicted RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 ADCK1Q86TW2 530 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 TMEM192Q8IY95 271 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 BADQ92934 168 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 MARK4Q96L34 752 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 SNX6Q9UNH7 406 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 KLHL20Q9Y2M5 609 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 ATRNL1Q5VV63 1379 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 hCG_1818297A0A087WSY0 165 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 SLC10A3P09131 477 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 CXCR2P25025 360 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 PIK3CGP48736 1102 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 FASTKQ14296 549 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 ARMCX6Q7L4S7 300 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 LUZP2Q86TE4 346 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 ZCCHC9Q8N567 271 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 OR7D4Q8NG98 312 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 SH3RF2Q8TEC5 729 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 PLD4Q96BZ4 506 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 LINGO1Q96FE5 620 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 LHX5Q9H2C1 402 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 PCDH18Q9HCL0 1135 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 ARHGEF4Q9NR80 690 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 POLR1DQ9Y2S0 133 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 NCANO14594 1321 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 CLUHO75153 1309 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 LRRC72A6NJI9 287 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 RHPN2P1A8MT19 583 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 PFDN1O60925 122 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 VIPP01282 170 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 PRNPP04156 253 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 TBL3Q12788 808 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 NAB1Q13506 487 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 GRM2Q14416 872 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 ZNHIT3Q15649 155 aaPredicted RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 SLC10A6Q3KNW5 377 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 PPP1R15BQ5SWA1 713 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 AGMOQ6ZNB7 445 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 MTDHQ86UE4 582 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 TAC4Q86UU9 113 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 FAM129CQ86XR2 697 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 TMEM132CQ8N3T6 1108 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 NKAPQ8N5F7 415 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 CCDC185Q8N715 623 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 POMGNT2Q8NAT1 580 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 TSTD1Q8NFU3 115 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 DQX1Q8TE96 717 aaKnown RBP5.4□□□□□ -1.55
LRP6-203ENST00000538239 CERS2Q96G23 380 aa5.4□□□□□ -1.55
LRP6-203ENST00000538239 GLYATL1P3A0A0U1RQE8 302 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 URADA6NGE7 173 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 C16orf96A6NNT2 1141 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 AVILO75366 819 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 SERPINE1P05121 402 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CNPP09543 421 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 CDH4P55283 916 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TBX2Q13207 712 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 RASA2Q15283 850 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 SF1Q15637 639 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 AP5B1Q2VPB7 878 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 KHDRBS2Q5VWX1 349 aaKnown RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 SAPCD2Q86UD0 394 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 GALNT13Q8IUC8 556 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 LRRC49Q8IUZ0 686 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PTGR2Q8N8N7 351 aaPredicted RBP5.39□□□□□ -1.55
LRP6-203ENST00000538239 SLC4A11Q8NBS3 891 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 SCAMP5Q8TAC9 235 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 STAG3L4Q8TBR4 150 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 QRFPRQ96P65 431 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 SH3GL1Q99961 368 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 DPEP2Q9H4A9 486 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 OR10H1Q9Y4A9 318 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 QSOX1O00391 747 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 MFSD11O43934 449 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 TRIM13O60858 407 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 FYNP06241 537 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CES1P23141 567 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 PRKCIP41743 596 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CRATP43155 626 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 WNT3AP56704 352 aa5.39□□□□□ -1.55
LRP6-203ENST00000538239 CYP4F2P78329 520 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms