RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 FAF2Q96CS3 445 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 LRCH3Q96II8 777 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 CHRAC1Q9NRG0 131 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 RAB6BQ9NRW1 208 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 TJP2Q9UDY2 1190 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 AGTPBP1Q9UPW5 1226 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 TESMINQ9Y4I5 508 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 PPP2R3BQ9Y5P8 575 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 RBBP6Q7Z6E9 1792 aaKnown RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 BTAF1O14981 1849 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 LOC102724428A0A0B4J2F2 783 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 RNF103-CHMP3A0A140T963 221 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 TCRBV3S1A0A5B6 114 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 FAM172BPA6NC97 362 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 SLC15A5A6NIM6 579 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 MEIS2O14770 477 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 INMTO95050 263 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 HSPA4LO95757 839 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 MYL3P08590 195 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 MBL2P11226 248 aaPredicted RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 ITGB6P18564 788 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 GTF2E2P29084 291 aaKnown RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 SIK1P57059 783 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 KIAA0319LQ8IZA0 1049 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 NLGN4XQ8N0W4 816 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 OR5H6Q8NGV6 325 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 HMGCLL1Q8TB92 370 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 FEZF2Q8TBJ5 459 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 RAB2BQ8WUD1 216 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 CPB2Q96IY4 423 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 KIFC3Q9BVG8 833 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 MTMR12Q9C0I1 747 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 TOR3AQ9H497 397 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 DHX33Q9H6R0 707 aaKnown RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 RUBCNLQ9H714 662 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 MOV10Q9HCE1 1003 aaKnown RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 DDX28Q9NUL7 540 aaKnown RBP10.79□□□□□ -0.68
RTN3-208ENST00000537981 COMMD8Q9NX08 183 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 KCNN3Q9UGI6 736 aa10.79□□□□□ -0.68
RTN3-208ENST00000537981 CITO14578 2027 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 M0QX08 132 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 TBX1O43435 398 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 MYL4P12829 197 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 IFI30P13284 250 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 ICAM2P13598 275 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 ITIH1P19827 911 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 CCND2P30279 289 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 AXLP30530 894 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 SLC7A1P30825 629 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 NT5C2P49902 561 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 UBXN2AP68543 259 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 KIZQ2M2Z5 673 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 RAB6CQ53S08 254 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 STEAP3Q658P3 488 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 ABRAXAS1Q6UWZ7 409 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 LYSMD2Q8IV50 215 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 DCLK2Q8N568 766 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 ANKFN1Q8N957 763 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 RP9Q8TA86 221 aaKnown RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 PEX13Q92968 403 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 VMP1Q96GC9 406 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 CCDC120Q96HB5 630 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 ZNF560Q96MR9 790 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 STRA6Q9BX79 667 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 BBS2Q9BXC9 721 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 RAB6CQ9H0N0 254 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 POLHQ9Y253 713 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 RWDD3Q9Y3V2 267 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 COPG1Q9Y678 874 aaKnown RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 GAKO14976 1311 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 TRIM77I1YAP6 450 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 ACOX3O15254 700 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 BBOX1O75936 387 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 APRTP07741 180 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 KRT3P12035 628 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 CYP3A7P24462 503 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 ECE1P42892 770 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 KRT6CP48668 564 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 HLCSP50747 726 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 VBP1P61758 197 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 IRF9Q00978 393 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 ITPK1Q13572 414 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 C15orf59Q2T9L4 293 aaPredicted RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 ADPRMQ3LIE5 342 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 NXNL2Q5VZ03 156 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 LRRC8EQ6NSJ5 796 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 SLC9A9Q8IVB4 645 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 PLPP6Q8IY26 295 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 CMTR2Q8IYT2 770 aaKnown RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 POC5Q8NA72 575 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 DEPDC1BQ8WUY9 529 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 CRYGNQ8WXF5 182 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 HDAC2Q92769 488 aaKnown RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 BIRC7Q96CA5 298 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 MUS81Q96NY9 551 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 UHRF1Q96T88 793 aaPredicted RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 HSD17B14Q9BPX1 270 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 CHID1Q9BWS9 393 aa10.78□□□□□ -0.68
RTN3-208ENST00000537981 MRPL9Q9BYD2 267 aaKnown RBP10.78□□□□□ -0.68
RTN3-208ENST00000537981 WDR12Q9GZL7 423 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms