RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 OR2T34Q8NGX1 318 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SLC35B2Q8TB61 432 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 KCTD4Q8WVF5 259 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SHC3Q92529 594 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 LRRC39Q96DD0 335 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SLC45A3Q96JT2 553 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 TSNARE1Q96NA8 513 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 DGCR6LQ9BY27 220 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 TUFT1Q9NNX1 390 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 DMAC2Q9NW81 257 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 GLTPQ9NZD2 209 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SNX7Q9UNH6 387 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 AP4E1Q9UPM8 1137 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 PABPN1LA6NDY0 278 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 LEUTXA8MZ59 168 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 PI15O43692 258 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SULT1B1O43704 296 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 ZBTB7AO95365 584 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 S100A6P06703 90 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 FCGR1AP12314 374 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 IL7P13232 177 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SPNP16150 400 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 CD9P21926 228 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 CSTF2P33240 577 aaKnown RBP eCLIP8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 PTPN7P35236 360 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 GRIA1P42261 906 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 NSFP46459 744 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 ARCN1P48444 511 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 POLR2GP62487 172 aaKnown RBP eCLIP8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SCRN3Q0VDG4 424 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 STX5Q13190 355 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 PCLAFQ15004 111 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 PLCL1Q15111 1095 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 PPP1R3AQ16821 1122 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 TFDP3Q5H9I0 405 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 MFSD7Q6UXD7 560 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 CYP2R1Q6VVX0 501 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SPOCD1Q6ZMY3 1216 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SPRED1Q7Z699 444 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 C10orf107Q8IVU9 208 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SLFN12Q8IYM2 578 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SLC7A3Q8WY07 619 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 NXNL1Q96CM4 212 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 MARK4Q96L34 752 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 DMRTB1Q96MA1 342 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 OR52B2Q96RD2 323 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 SECISBP2Q96T21 854 aaKnown RBP8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 ZBTB26Q9HCK0 441 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 HPS4Q9NQG7 708 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 CCM2LQ9NUG4 571 aaPredicted RBP8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 MTMR7Q9Y216 660 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF175Q9Y473 711 aa8.6□□□□□ -1.03
SRGAP1-202ENST00000537556 KRT87PA6NCN2 255 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 H0Y626 953 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 CTDSP2O14595 271 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 TSPAN4O14817 238 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 DNAJB2P25686 324 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 RPS9P46781 194 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 RAP1GAPP47736 663 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 GTF2IP78347 998 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF45Q02386 682 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ENPEPQ07075 957 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 EPC2Q52LR7 807 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 SAMD4BQ5PRF9 694 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ARSKQ6UWY0 536 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 CATSPER4Q7RTX7 472 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 CDH24Q86UP0 819 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 AMIGO1Q86WK6 493 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 PLCZ1Q86YW0 608 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 FAM71DQ8N9W8 422 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ST13P5Q8NFI4 369 aaPredicted RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 CANT1Q8WVQ1 401 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 MUL1Q969V5 352 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 CIDECQ96AQ7 238 aaPredicted RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 GDF15Q99988 308 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 SPAG4Q9NPE6 437 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 B3GNT2Q9NY97 397 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 EIF3KQ9UBQ5 218 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ZC3H7BQ9UGR2 993 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNRF3Q9ULT6 936 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 VWA7Q9Y334 891 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 A0A0B4J203 849 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 TCRBV7S3A2A0A539 114 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 NCAM2O15394 837 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ZNF780AO75290 641 aaPredicted RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 MED24O75448 989 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 FAM13AO94988 1023 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ERP29P30040 261 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 ACOT2P49753 483 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 GABARAPL2P60520 117 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 GPR85P60893 370 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 TBRG1Q3YBR2 411 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 GARNL3Q5VVW2 1013 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 LRRC8EQ6NSJ5 796 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 FIP1L1Q6UN15 594 aaKnown RBP8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 GDPD3Q7L5L3 318 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 PRSS48Q7RTY5 328 aa8.59□□□□□ -1.03
SRGAP1-202ENST00000537556 EPHX4Q8IUS5 362 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms