RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 TAX1BP1Q86VP1 789 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 LRRC34Q8IZ02 419 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ZNF707Q96C28 371 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 FBXO10Q9UK96 956 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 TLDC2A0PJX2 215 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 HIDE1A8MVS5 230 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 EDF1O60869 148 aaKnown RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 DNAJC8O75937 253 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 MYCP01106 439 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 GSTA1P08263 222 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SBK3P0C264 359 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 LINGO3P0C6S8 592 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SLC11A2P49281 568 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ZNF140P52738 457 aaPredicted RBP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ARPP19P56211 112 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 CRADDP78560 199 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ZNF77Q15935 545 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 FAM91A1Q658Y4 838 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 PDPK2PQ6A1A2 396 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 MIB1Q86YT6 1006 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 TRIM42Q8IWZ5 723 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 LGI2Q8N0V4 545 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SHKBP1Q8TBC3 707 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 AGAP11Q8TF27 550 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 RNF34Q969K3 372 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 ZNF778Q96MU6 729 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SAMD11Q96NU1 681 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 GPR78Q96P69 363 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 NUDCD1Q96RS6 583 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 YME1L1Q96TA2 773 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 RBM22Q9NW64 420 aaKnown RBP eCLIP8.08□□□□□ -1.12
COL21A1-212ENST00000535941 SLC17A7Q9P2U7 560 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 HAO1Q9UJM8 370 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 BLOC1S6Q9UL45 172 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 PPIL1Q9Y3C6 166 aa8.08□□□□□ -1.12
COL21A1-212ENST00000535941 POC1B-GALNT4F8VUJ3 575 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 TRAFD1O14545 582 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 TGDSO95455 350 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 ITGA2BP08514 1039 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 HNRNPA1P09651 372 aaKnown RBP eCLIP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 CD9P21926 228 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 ADRA1DP25100 572 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 HADHAP40939 763 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 ERVK-21P61565 698 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 PDE1CQ14123 709 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 PRPSAP1Q14558 356 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 TYSND1Q2T9J0 566 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 SIRPB2Q5JXA9 342 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 ATG14Q6ZNE5 492 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 OTOP2Q7RTS6 562 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 HS6ST3Q8IZP7 471 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 TAB3Q8N5C8 712 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 WFDC5Q8TCV5 224 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 TCP10LQ8TDR4 215 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 CCT6BQ92526 530 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 SMC6Q96SB8 1091 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 PRKD2Q9BZL6 878 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 CHRAC1Q9NRG0 131 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 NSMCE4AQ9NXX6 385 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 SLC17A6Q9P2U8 582 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 TBK1Q9UHD2 729 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 H7C0S8 307 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 LIN7AO14910 233 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 GJB3O75712 270 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 PIAS1O75925 651 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 MOCS2O96007 188 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 IMPDH2P12268 514 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 ALOX15P16050 662 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 GP5P40197 560 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 RGRP47804 291 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 LEPRP48357 1165 aaKnown RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 HARS2P49590 506 aaKnown RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 WNT3AP56704 352 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 FSCBQ5H9T9 825 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 MARC1Q5VT66 337 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 NCEH1Q6PIU2 408 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 KIAA0408Q6ZU52 694 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 ZC3HC1Q86WB0 502 aaKnown RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 DENND1CQ8IV53 801 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 LMNTD2Q8IXW0 634 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 LEMD2Q8NC56 503 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 ZNF398Q8TD17 642 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 PTPRN2Q92932 1015 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 MFSD3Q96ES6 412 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 SEPT10Q9P0V9 454 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 SPTBN5Q9NRC6 3674 aaKnown RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 SMIM23A6NLE4 172 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 ADH1AP07327 375 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 C7P10643 843 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 OR1E1P30953 314 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 DSC2Q02487 901 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 VEPH1Q14D04 833 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 HSF5Q4G112 596 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 RFWD3Q6PCD5 774 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 KYAT3Q6YP21 454 aaKnown RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 TMEM184AQ6ZMB5 413 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 TFAP2DQ7Z6R9 452 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 DCAF4L2Q8NA75 395 aa8.07□□□□□ -1.12
COL21A1-212ENST00000535941 HJURPQ8NCD3 748 aaPredicted RBP8.07□□□□□ -1.12
COL21A1-212ENST00000535941 DDX50Q9BQ39 737 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms