RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ERVW-1Q9UQF0 538 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 ARL2BPQ9Y2Y0 163 aa12.46□□□□□ -0.41
SCARB1-204ENST00000535005 SGK1O00141 431 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 NPC1O15118 1278 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 ATP9BO43861 1147 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 SMNDC1O75940 238 aaKnown RBP eCLIP12.46□□□□□ -0.422e-7■■■■■ 32.4
SCARB1-204ENST00000535005 ECEL1O95672 775 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 GAS8O95995 478 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 MT-CO1P00395 513 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 VIMP08670 466 aaKnown RBP12.46□□□□□ -0.42
SCARB1-204ENST00000535005 SRCP12931 536 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 HNRNPLP14866 589 aaKnown RBP eCLIP12.46□□□□□ -0.421e-7■■■■□ 21.9
SCARB1-204ENST00000535005 GDF10P55107 478 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 ZBTB17Q13105 803 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 PTPRNQ16849 979 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 FSTL4Q6MZW2 842 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 LINGO4Q6UY18 593 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 JAMLQ86YT9 394 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 BBS5Q8N3I7 341 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 MDM1Q8TC05 714 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 FAM3CQ92520 227 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 EZH1Q92800 747 aaPredicted RBP12.46□□□□□ -0.42
SCARB1-204ENST00000535005 MYO19Q96H55 970 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 SPATA13Q96N96 652 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 CIPCQ9C0C6 399 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 CEP44Q9C0F1 390 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 DPH5Q9H2P9 285 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 PCDH9Q9HC56 1237 aa12.46□□□□□ -0.42
SCARB1-204ENST00000535005 RBM22Q9NW64 420 aaKnown RBP eCLIP12.46□□□□□ -0.422e-16■■■■■ 75.9
SCARB1-204ENST00000535005 K7EQS6 105 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 OPHN1O60890 802 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 TMCC1O94876 653 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 NUMBP49757 651 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 STARD6P59095 220 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 NSUN2Q08J23 767 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCARB1-204ENST00000535005 GRSF1Q12849 480 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCARB1-204ENST00000535005 BLMHQ13867 455 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 PON2Q15165 354 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ACCSLQ4AC99 568 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ANKRD20A2Q5SQ80 823 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ANKRD20A1Q5TYW2 823 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ANKRD20A3Q5VUR7 823 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 CAPRIN2Q6IMN6 1127 aaKnown RBP12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ZDHHC24Q6UX98 284 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 TPRG1Q6ZUI0 275 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 GSTA5Q7RTV2 222 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 TBC1D1Q86TI0 1168 aaPredicted RBP12.45□□□□□ -0.42
SCARB1-204ENST00000535005 SFTPA1Q8IWL2 248 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 PLPP6Q8IY26 295 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF567Q8N184 647 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 CCDC89Q8N998 374 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 AGAP11Q8TF27 550 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF419Q96HQ0 510 aaPredicted RBP12.45□□□□□ -0.42
SCARB1-204ENST00000535005 SHDQ96IW2 340 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 SERPINB12Q96P63 405 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ELAC2Q9BQ52 826 aaKnown RBP12.45□□□□□ -0.42
SCARB1-204ENST00000535005 SEPT10Q9P0V9 454 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 THAP10Q9P2Z0 257 aaPredicted RBP12.45□□□□□ -0.42
SCARB1-204ENST00000535005 SLCO3A1Q9UIG8 710 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 HCN2Q9UL51 889 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 PLA2G4CQ9UP65 541 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 ACTL7AQ9Y615 435 aa12.45□□□□□ -0.42
SCARB1-204ENST00000535005 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 SMAD6O43541 496 aaKnown RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 RPSAP08865 295 aaKnown RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 RPL22P35268 128 aaKnown RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 GCKP35557 465 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 NNMTP40261 264 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 KIR2DL1P43626 348 aaPredicted RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 CSNK1DP48730 415 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 STK19P49842 368 aaPredicted RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ENPP2Q13822 863 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 PTK6Q13882 451 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 FBXO43Q4G163 708 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ALG1LQ6GMV1 187 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF852Q6ZMS4 543 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ASRGL1Q7L266 308 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 PID1Q7Z2X4 250 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF687Q8N1G0 1237 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 PCDH20Q8N6Y1 951 aaKnown RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ATP11CQ8NB49 1132 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 GLIS1Q8NBF1 620 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 CYB5D2Q8WUJ1 264 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 SORCS1Q8WY21 1168 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 KLHL29Q96CT2 875 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 RPL10LQ96L21 214 aaKnown RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 MGME1Q9BQP7 344 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 TRIM51Q9BSJ1 452 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 PAK5Q9P286 719 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 LHX3Q9UBR4 397 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 TCF20Q9UGU0 1960 aaKnown RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 MIA3Q5JRA6 1907 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 K7ERQ8 282 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ZBTB24O43167 697 aaPredicted RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 ZNF821O75541 412 aaPredicted RBP12.44□□□□□ -0.42
SCARB1-204ENST00000535005 UBOX5O94941 541 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 IFNB1P01574 187 aa12.44□□□□□ -0.42
SCARB1-204ENST00000535005 HLA-DQB2P05538 268 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms