RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 EIF2B5Q13144 721 aaKnown RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 MTA1Q13330 715 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 C1orf61Q13536 156 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 STAT4Q14765 748 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 KIF26BQ2KJY2 2108 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 SETMARQ53H47 684 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 CCDC122Q5T0U0 273 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 FBXL19Q6PCT2 694 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 CCNI2Q6ZMN8 369 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 TTC7BQ86TV6 843 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 VPS36Q86VN1 386 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 PLA2G15Q8NCC3 412 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 PTCD2Q8WV60 388 aaKnown RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 TSC1Q92574 1164 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 CENPTQ96BT3 561 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 KLHDC7BQ96G42 594 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 CRELD1Q96HD1 420 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 CNDP2Q96KP4 475 aaKnown RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 CSPG4P5Q96PW8 444 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 PPP1R9BQ96SB3 815 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 C1QTNF2Q9BXJ5 285 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 EDEM3Q9BZQ6 932 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 KDM4CQ9H3R0 1056 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 PCDH18Q9HCL0 1135 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 GDF3Q9NR23 364 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 GPR27Q9NS67 375 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 SPTLC3Q9NUV7 552 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 UBA2Q9UBT2 640 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 MSRB2Q9Y3D2 182 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 HYOU1Q9Y4L1 999 aa9.75□□□□□ -0.85
SSBP3-215ENST00000533946 COL5A1P20908 1838 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-215ENST00000533946 ATMQ13315 3056 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 LRP4O75096 1905 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 PMS2P1A4D2B8 440 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 FAM221BA6H8Z2 402 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 SRRM3A6NNA2 597 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 TMEM110-MUSTN1A8MSY1 372 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 K7ESM1 405 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 ENC1O14682 589 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 PRPSAP2O60256 369 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 GCATO75600 419 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 ITGAVP06756 1048 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 HOXB3P14651 431 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 HNRNPA2B1P22626 353 aaKnown RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 DGKAP23743 735 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 GRK6P43250 576 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 RXRGP48443 463 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 ACADVLP49748 655 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 YBEYP58557 167 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 SNRPD1P62314 119 aaKnown RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 SFSWAPQ12872 951 aaKnown RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 SLC10A2Q12908 348 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 RALGDSQ12967 914 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 LLGL1Q15334 1064 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 PROX2Q3B8N5 592 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 ALKBH5Q6P6C2 394 aaKnown RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 PTAR1Q7Z6K3 402 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 SRLQ86TD4 932 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 KDF1Q8NAX2 398 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 TP53I13Q8NBR0 393 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 FNIP1Q8TF40 1166 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 GOLPH3Q9H4A6 298 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 PCDH12Q9NPG4 1184 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 DYRK4Q9NR20 520 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 ANAPC7Q9UJX3 599 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 LUC7L2Q9Y383 392 aaKnown RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
SSBP3-215ENST00000533946 NEUROG3Q9Y4Z2 214 aa9.74□□□□□ -0.85
SSBP3-215ENST00000533946 ANKRD62A6NC57 917 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 GOLGA6L19H0YKK7 550 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 TNFSF14O43557 240 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 AP1G1O43747 822 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 MFSD11O43934 449 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 CCDC172P0C7W6 258 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 NDST2P52849 883 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 RPS21P63220 83 aaKnown RBP9.73□□□□□ -0.85
SSBP3-215ENST00000533946 IRF4Q15306 451 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 DPYSL2Q16555 572 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 WSCD2Q2TBF2 565 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 PARP15Q460N3 678 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 INO80DQ53TQ3 878 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-215ENST00000533946 CRTC1Q6UUV9 634 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 TMPRSS7Q7RTY8 843 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 GAS2L3Q86XJ1 694 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 VSTM4Q8IW00 320 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 PLPP6Q8IY26 295 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 PQLC3Q8N755 202 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 PCDH19Q8TAB3 1148 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 RAPGEF5Q92565 580 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 SYN2Q92777 582 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-215ENST00000533946 FEM1CQ96JP0 617 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 CCDC114Q96M63 670 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 GDAP1L1Q96MZ0 367 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 CLPBQ9H078 707 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 SUV39H2Q9H5I1 410 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 CATSPERBQ9H7T0 1116 aa9.73□□□□□ -0.85
SSBP3-215ENST00000533946 ERVMER34-1Q9H9K5 563 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms