RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 DSC2Q02487 901 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 NIPAL4Q0D2K0 466 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 SRSF5Q13243 272 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 SLC14A2Q15849 920 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 POM121L1PQ3SYA9 428 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 PIP5KL1Q5T9C9 394 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 AGBL4Q5VU57 503 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 PID1Q7Z2X4 250 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 CAMK1DQ8IU85 385 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 ZNF567Q8N184 647 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 FAM160A2Q8N612 972 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 FRMD1Q8N878 549 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 C1orf54Q8WWF1 131 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 ATG4AQ8WYN0 398 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 RAB7BQ96AH8 199 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 IMP4Q96G21 291 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 MS4A14Q96JA4 679 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 ZC3H10Q96K80 434 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 CEP41Q9BYV8 373 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 PCED1AQ9H1Q7 454 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 EPC1Q9H2F5 836 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 SEMA4AQ9H3S1 761 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 C10orf88Q9H8K7 445 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 KLHL8Q9P2G9 620 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 DRG1Q9Y295 367 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 TTLL3Q9Y4R7 772 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 R4GN57 208 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 SHROOM3Q8TF72 1996 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 ZNF185O15231 689 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 MAP3K13O43283 966 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 PLRG1O43660 514 aaKnown RBP16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 MMP2P08253 660 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 ADRB3P13945 408 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 BCKDHBP21953 392 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 ACSL1P33121 698 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 CD68P34810 354 aaPredicted RBP16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 NBL1P41271 181 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 SIM2Q14190 667 aaPredicted RBP16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 FBXL19Q6PCT2 694 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 SYT10Q6XYQ8 523 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 CEP68Q76N32 757 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 PARS2Q7L3T8 475 aaKnown RBP16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 FAM124AQ86V42 546 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 PRELID2Q8N945 189 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 CADM4Q8NFZ8 388 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 TADA1Q96BN2 335 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 RTP4Q96DX8 246 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 SPATA13Q96N96 652 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 FCRL5Q96RD9 977 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 RNF14Q9UBS8 474 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 PCDHGC4Q9Y5F7 938 aa16.61■□□□□ 0.25
PACSIN3-210ENST00000533686 LRRC72A6NJI9 287 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 C10orf142B7Z368 130 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 PLK4O00444 970 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 AP1G1O43747 822 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 FZD6O60353 706 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 OPHN1O60890 802 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 NDUFS2O75306 463 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 GCATO75600 419 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 RHOBTB1O94844 696 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 SEMA4FO95754 770 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 ITGAVP06756 1048 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 TIMP2P16035 220 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 CA4P22748 312 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 CD86P42081 329 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 ADPRHP54922 357 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 POLR2LP62875 67 aaKnown RBP16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 SKOR1P84550 965 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 TRAF2Q12933 501 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 IHHQ14623 411 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 PLK5Q496M5 336 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 ANKRD20A2Q5SQ80 823 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 CFAP58Q5T655 872 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 ANKRD20A1Q5TYW2 823 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 ANKRD20A3Q5VUR7 823 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 ITPRIPL1Q6GPH6 555 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 NEK5Q6P3R8 708 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 PRPF39Q86UA1 669 aaKnown RBP16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 CREG2Q8IUH2 290 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 FAM71DQ8N9W8 422 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 OR2T34Q8NGX1 318 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 OR14C36Q8NHC7 312 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 TMEM121Q9BTD3 319 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 DUSP15Q9H1R2 295 aaPredicted RBP16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 PREBQ9HCU5 417 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 TPX2Q9ULW0 747 aaKnown RBP16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 ZNF148Q9UQR1 794 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 RAI2Q9Y5P3 530 aa16.6■□□□□ 0.25
PACSIN3-210ENST00000533686 MUC6Q6W4X9 2439 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 PLXND1Q9Y4D7 1925 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 PGLSO95336 258 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 NFKB1P19838 968 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 TAS2R38P59533 333 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 RPL6Q02878 288 aaKnown RBP16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 ELF2Q15723 593 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 CYP1B1Q16678 543 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 UGP2Q16851 508 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 P3H1Q32P28 736 aa16.59■□□□□ 0.25
PACSIN3-210ENST00000533686 ARMC12Q5T9G4 340 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms