RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PCMTD2Q9NV79 361 aa12.41□□□□□ -0.42
CHD7-211ENST00000532149 SLC17A7Q9P2U7 560 aa12.41□□□□□ -0.42
CHD7-211ENST00000532149 RPL26L1Q9UNX3 145 aaKnown RBP12.41□□□□□ -0.42
CHD7-211ENST00000532149 SLC12A4Q9UP95 1085 aa12.41□□□□□ -0.42
CHD7-211ENST00000532149 NR2E3Q9Y5X4 410 aa12.41□□□□□ -0.42
CHD7-211ENST00000532149 A0A1W2PQ67 120 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 GOLGA8CPA6NN73 597 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 J3KR12 359 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 ADAM12O43184 909 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 USP12O75317 370 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 SNNO75324 88 aaPredicted RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 SOAT2O75908 522 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 MT-CYBP00156 380 aaPredicted RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 PENKP01210 267 aaPredicted RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 SERPINE1P05121 402 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 RB1P06400 928 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 HMBSP08397 361 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 MBL2P11226 248 aaPredicted RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 CSF2RAP15509 400 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 STMN1P16949 149 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 HDCP19113 662 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 CD86P42081 329 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 LEPRP48357 1165 aaKnown RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 KCNQ1P51787 676 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 ARFIP2P53365 341 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 MPPE1Q53F39 396 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 KLC3Q6P597 504 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 ARHGAP36Q6ZRI8 547 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 CLEC14AQ86T13 490 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 ZC3HC1Q86WB0 502 aaKnown RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 DENND1CQ8IV53 801 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 PDCD6IPQ8WUM4 868 aaKnown RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 INPP5DQ92835 1189 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 WNT2BQ93097 391 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 VWCEQ96DN2 955 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 SAMD11Q96NU1 681 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 RAB3IPQ96QF0 476 aaPredicted RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 NUDCD1Q96RS6 583 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 C2orf49Q9BVC5 232 aaPredicted RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 IARS2Q9NSE4 1012 aaKnown RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 AGO1Q9UL18 857 aaKnown RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 APOBEC2Q9Y235 224 aaKnown RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 ACOT9Q9Y305 439 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 COMMD10Q9Y6G5 202 aa12.4□□□□□ -0.42
CHD7-211ENST00000532149 ZFP37Q9Y6Q3 630 aaPredicted RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 NYNRINQ9P2P1 1898 aaKnown RBP12.4□□□□□ -0.42
CHD7-211ENST00000532149 A0A096LPK6 155 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 TRAV19A0A0A6YYK7 116 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 C2orf81A6NN90 581 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 H3BNC9 293 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 TEX28O15482 410 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 INSIG1O15503 277 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 VAPBO95292 243 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 CYBBP04839 570 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 CPA3P15088 417 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 OGNP20774 298 aaKnown RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 NMBRP28336 390 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 PPARGP37231 505 aaPredicted RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 SCTRP47872 440 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 CSRP3P50461 194 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 RAB10P61026 200 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 AP1S1P61966 158 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 PRAMEP78395 509 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 SMAD3P84022 425 aaKnown RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 FPGSQ05932 587 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 POU6F1Q14863 301 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 ZKSCAN8Q15776 578 aaPredicted RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 FAM47EQ6ZV65 393 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 DCAF4L2Q8NA75 395 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 TTC8Q8TAM2 541 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 KLF6Q99612 283 aaPredicted RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 SEMA3CQ99985 751 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 NMRAL1Q9HBL8 299 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 INTS10Q9NVR2 710 aaKnown RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 UBP1Q9NZI7 540 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 COPG2Q9UBF2 871 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 FBXO5Q9UKT4 447 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.39□□□□□ -0.43
CHD7-211ENST00000532149 MIA3Q5JRA6 1907 aa12.39□□□□□ -0.43
CHD7-211ENST00000532149 E2F8A0AVK6 867 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 TRIM43BA6NCK2 446 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 FOXO6A8MYZ6 492 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 H0Y626 953 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 GFRA2O00451 464 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 TRIM13O60858 407 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 CXCL14O95715 111 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 MYCP01106 439 aaPredicted RBP12.38□□□□□ -0.43
CHD7-211ENST00000532149 PROCP04070 461 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 C2P06681 752 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 MMP2P08253 660 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 RBP1P09455 135 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 HNRNPA1P09651 372 aaKnown RBP eCLIP12.38□□□□□ -0.43
CHD7-211ENST00000532149 TCF3P15923 654 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 TPH1P17752 444 aa12.38□□□□□ -0.43
CHD7-211ENST00000532149 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
CHD7-211ENST00000532149 CD9P21926 228 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms