RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 VOPP1Q96AW1 172 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 GPR174Q9BXC1 333 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 GLOD4Q9HC38 313 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.51■■□□□ 1.19
LRRK1-208ENST00000532029 TRHDEQ9UKU6 1024 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 RAB23Q9ULC3 237 aa22.51■■□□□ 1.19
LRRK1-208ENST00000532029 TTC7AQ9ULT0 858 aaPredicted RBP22.51■■□□□ 1.19
LRRK1-208ENST00000532029 LRRC72A6NJI9 287 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 SOCS5O75159 536 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 RHOBTB1O94844 696 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 SEMA4FO95754 770 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 ADRB3P13945 408 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 PRLRP16471 622 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 CA4P22748 312 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 ACSL1P33121 698 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 NIPAL4Q0D2K0 466 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 SIX1Q15475 284 aaPredicted RBP22.5■■□□□ 1.19
LRRK1-208ENST00000532029 CCNG2Q16589 344 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 FAM182AQ5T1J6 154 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 PIP5KL1Q5T9C9 394 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 BRAT1Q6PJG6 821 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 LPCAT2Q7L5N7 544 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 ZNF567Q8N184 647 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 ARRDC2Q8TBH0 407 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 PDCD6IPQ8WUM4 868 aaKnown RBP22.5■■□□□ 1.19
LRRK1-208ENST00000532029 FAM122AQ96E09 287 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 MS4A14Q96JA4 679 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 SLC25A51Q9H1U9 297 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 EPC1Q9H2F5 836 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 HOMER3Q9NSC5 361 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 ZNF148Q9UQR1 794 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 PCDHGC4Q9Y5F7 938 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 SAR1BQ9Y6B6 198 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 EML5Q05BV3 1969 aa22.5■■□□□ 1.19
LRRK1-208ENST00000532029 A0A1W2PQ67 120 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 FAM47DPA6NHR8 397 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 NBL1P41271 181 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 CD86P42081 329 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 ADPRHP54922 357 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 SNX1Q13596 522 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 PLK5Q496M5 336 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 ITPRIPL1Q6GPH6 555 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 TTC7BQ86TV6 843 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 ACTRT1Q8TDG2 376 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 NKD2Q969F2 451 aaPredicted RBP22.49■■□□□ 1.19
LRRK1-208ENST00000532029 RAB7BQ96AH8 199 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 FAM131CQ96AQ9 280 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 NSMCE3Q96MG7 304 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 TMEM121Q9BTD3 319 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 KDM4CQ9H3R0 1056 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 SEMA4AQ9H3S1 761 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 RSPH14Q9UHP6 348 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 RAI2Q9Y5P3 530 aa22.49■■□□□ 1.19
LRRK1-208ENST00000532029 MUC6Q6W4X9 2439 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 TSPAN11A1L157 253 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 ZNF185O15231 689 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 PLRG1O43660 514 aaKnown RBP22.48■■□□□ 1.19
LRRK1-208ENST00000532029 NFKB1P19838 968 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 SUOXP51687 545 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 POLR2LP62875 67 aaKnown RBP22.48■■□□□ 1.19
LRRK1-208ENST00000532029 NHLH1Q02575 133 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 TRAF2Q12933 501 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 PMS2CLQ68D20 193 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 SYT10Q6XYQ8 523 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 TMEFF1Q8IYR6 380 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 FAM71DQ8N9W8 422 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 OR2T34Q8NGX1 318 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 ECHDC3Q96DC8 303 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 IMP4Q96G21 291 aaKnown RBP22.48■■□□□ 1.19
LRRK1-208ENST00000532029 ZC3H10Q96K80 434 aaKnown RBP22.48■■□□□ 1.19
LRRK1-208ENST00000532029 C16orf45Q96MC5 204 aaPredicted RBP22.48■■□□□ 1.19
LRRK1-208ENST00000532029 SPATA13Q96N96 652 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 PCED1AQ9H1Q7 454 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 DUSP15Q9H1R2 295 aaPredicted RBP22.48■■□□□ 1.19
LRRK1-208ENST00000532029 USP29Q9HBJ7 922 aa22.48■■□□□ 1.19
LRRK1-208ENST00000532029 PLXND1Q9Y4D7 1925 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3DA0A087WVF3 549 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3IA0A087WXS9 549 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3EA0A087X179 549 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3KA0A087X1G2 549 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3FA6NER0 549 aaPredicted RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 PRR23AA6NEV1 266 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3LB9A6J9 549 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TRAFD1O14545 582 aaPredicted RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 HTRA2O43464 458 aaPredicted RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 OPHN1O60890 802 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 CPP00450 1065 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TBC1D3HP0C7X1 549 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 TIMP2P16035 220 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 STIP1P31948 543 aaKnown RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 CD68P34810 354 aaPredicted RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 DHPSP49366 369 aaPredicted RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 SKOR1P84550 965 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 OASLQ15646 514 aaKnown RBP22.47■■□□□ 1.19
LRRK1-208ENST00000532029 LPAL2Q16609 132 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 SPDYCQ5MJ68 293 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 ANKRD20A2Q5SQ80 823 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 ARMC12Q5T9G4 340 aa22.47■■□□□ 1.19
LRRK1-208ENST00000532029 ANKRD20A1Q5TYW2 823 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms