RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ZDHHC2Q9UIJ5 367 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 POMPQ9Y244 141 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 DNAH12Q6ZR08 3092 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 FAM155AB1AL88 458 aaPredicted RBP17.37■□□□□ 0.37
BRCA2-204ENST00000530893 SLC7A4O43246 635 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
BRCA2-204ENST00000530893 PIK3R1P27986 724 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 CDC25CP30307 473 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 EPHB1P54762 984 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 TRIM32Q13049 653 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 AGAP9Q5VTM2 703 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 TTC1Q99614 292 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 ZNF385DQ9H6B1 395 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 WDR55Q9H6Y2 383 aaPredicted RBP17.37■□□□□ 0.37
BRCA2-204ENST00000530893 SP110Q9HB58 689 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 CYP4F11Q9HBI6 524 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 VPS28Q9UK41 221 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 PPM1HQ9ULR3 514 aa17.37■□□□□ 0.37
BRCA2-204ENST00000530893 B4GALT3O60512 393 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 PDHA1P08559 390 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 EPHA3P29320 983 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 SLC26A3P40879 764 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 CHRNA4P43681 627 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 OR1G1P47890 313 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 SATB1Q01826 763 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 NSUN2Q08J23 767 aaKnown RBP eCLIP17.36■□□□□ 0.37
BRCA2-204ENST00000530893 DLG1Q12959 904 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 LAMB3Q13751 1172 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 TRIP4Q15650 581 aaPredicted RBP17.36■□□□□ 0.37
BRCA2-204ENST00000530893 PCSK7Q16549 785 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 DDR2Q16832 855 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 CLLU1OSQ5K130 101 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 SH2D4BQ5SQS7 431 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 KLC3Q6P597 504 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 DHDDSQ86SQ9 333 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 RTN4RL1Q86UN2 441 aaPredicted RBP17.36■□□□□ 0.37
BRCA2-204ENST00000530893 SLC25A41Q8N5S1 370 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 HEXDCQ8WVB3 486 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 TADA1Q96BN2 335 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 HMCESQ96FZ2 354 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 MAELQ96JY0 434 aaKnown RBP17.36■□□□□ 0.37
BRCA2-204ENST00000530893 FAR2Q96K12 515 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 NR1H4Q96RI1 486 aaPredicted RBP17.36■□□□□ 0.37
BRCA2-204ENST00000530893 LBHD1Q9BQE6 289 aaPredicted RBP17.36■□□□□ 0.37
BRCA2-204ENST00000530893 NUF2Q9BZD4 464 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 SHCBP1LQ9BZQ2 653 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 ATXN3LQ9H3M9 355 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 NT5MQ9NPB1 228 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 TTC3P53804 2025 aa17.36■□□□□ 0.37
BRCA2-204ENST00000530893 RTN3O95197 1032 aaPredicted RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 BAG2O95816 211 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 RBP1P09455 135 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 COL6A1P12109 1028 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 CKBP12277 381 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 CCND3P30281 292 aaPredicted RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 XIAPP98170 497 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 PRKCZQ05513 592 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 MSLNQ13421 630 aaPredicted RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 CYLC2Q14093 348 aaPredicted RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 CCNIQ14094 377 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 BTG3Q14201 252 aaPredicted RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 ZNF460Q14592 562 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 PARP15Q460N3 678 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 MAP3K21Q5TCX8 1036 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 RNF180Q86T96 592 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 KYQ8NBH2 561 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 PEX13Q92968 403 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 GMIPQ9P107 970 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 STK39Q9UEW8 545 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 MROH6A6NGR9 719 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 OR6C75A6NL08 312 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 DRGXA6NNA5 263 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 TADA2AO75478 443 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 CD86P42081 329 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 IL10RBQ08334 325 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 SLC10A7Q0GE19 358 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 GALNT1Q10472 559 aaPredicted RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 TECRLQ5HYJ1 363 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 VARS2Q5ST30 1063 aaKnown RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 KDELC2Q7Z4H8 507 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 TFAP2DQ7Z6R9 452 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 PLCD3Q8N3E9 789 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 AFAP1L2Q8N4X5 818 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 KDM1BQ8NB78 822 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 SLC26A7Q8TE54 656 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 ECSITQ9BQ95 431 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 MFSD1Q9H3U5 465 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 EML4Q9HC35 981 aaKnown RBP17.35■□□□□ 0.37
BRCA2-204ENST00000530893 IGSF5Q9NSI5 407 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 COMMD8Q9NX08 183 aa17.35■□□□□ 0.37
BRCA2-204ENST00000530893 J3KR12 359 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 NEMP1O14524 444 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 PDE5AO76074 875 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 PENKP01210 267 aaPredicted RBP17.34■□□□□ 0.37
BRCA2-204ENST00000530893 MMP2P08253 660 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 LTA4HP09960 611 aaKnown RBP17.34■□□□□ 0.37
BRCA2-204ENST00000530893 PRKAR2AP13861 404 aaKnown RBP17.34■□□□□ 0.37
BRCA2-204ENST00000530893 YWHAQP27348 245 aa17.34■□□□□ 0.37
BRCA2-204ENST00000530893 YBEYP58557 167 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms