RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 CCDC15Q0P6D6 951 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 ANKRD20A2Q5SQ80 823 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 ANKRD20A1Q5TYW2 823 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 ANKRD20A3Q5VUR7 823 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 KIAA1324Q6UXG2 1013 aaKnown RBP16.21■□□□□ 0.19
BRK1-201ENST00000530758 PID1Q7Z2X4 250 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 PRPF39Q86UA1 669 aaKnown RBP16.21■□□□□ 0.19
BRK1-201ENST00000530758 KLHDC8BQ8IXV7 354 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 OR6K2Q8NGY2 324 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 GAB3Q8WWW8 586 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 ARRDC3Q96B67 414 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.19
BRK1-201ENST00000530758 AGAP3Q96P47 875 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 FCRL5Q96RD9 977 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 TMEM121Q9BTD3 319 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 TPSD1Q9BZJ3 242 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 KDM4CQ9H3R0 1056 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 SGK2Q9HBY8 427 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 FBXL12Q9NXK8 326 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 WSB2Q9NYS7 404 aaPredicted RBP16.21■□□□□ 0.19
BRK1-201ENST00000530758 SEPT10Q9P0V9 454 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 NCKAP1Q9Y2A7 1128 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 R4GN57 208 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 CFAP54Q96N23 3096 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 ZNF292O60281 2723 aa16.21■□□□□ 0.19
BRK1-201ENST00000530758 IGHV1OR15-9A0A0B4J2B8 117 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 TTC24A2A3L6 582 aaPredicted RBP16.2■□□□□ 0.18
BRK1-201ENST00000530758 C16orf96A6NNT2 1141 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 KPNA3O00505 521 aaPredicted RBP16.2■□□□□ 0.18
BRK1-201ENST00000530758 HRO43593 1189 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 OPHN1O60890 802 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 NEBLO76041 1014 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 UGT2B4P06133 528 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 SERPINF2P08697 491 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 SERPINA4P29622 427 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 METAP1P53582 386 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 DSC2Q02487 901 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 CNTN1Q12860 1018 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 P3H1Q32P28 736 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 PIP5KL1Q5T9C9 394 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 BRAT1Q6PJG6 821 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 ERN2Q76MJ5 926 aaKnown RBP16.2■□□□□ 0.18
BRK1-201ENST00000530758 C11orf74Q86VG3 221 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 CAMK1DQ8IU85 385 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 HDDC3Q8N4P3 179 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 GRIN3AQ8TCU5 1115 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 RAB7BQ96AH8 199 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 SPATA13Q96N96 652 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 KLHL32Q96NJ5 620 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 CEP41Q9BYV8 373 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 NEUROG2Q9H2A3 272 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 CD93Q9NPY3 652 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 ZNF148Q9UQR1 794 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 PPIL1Q9Y3C6 166 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 FRYLO94915 3013 aa16.2■□□□□ 0.18
BRK1-201ENST00000530758 NUMA1Q14980 2115 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 FAM186AA6NE01 2351 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 A0A1W2PP55 124 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 AP1G1O43747 822 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 STK10O94804 968 aaKnown RBP16.19■□□□□ 0.18
BRK1-201ENST00000530758 PIGNO95427 931 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 TIMP2P16035 220 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 CD6P30203 668 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 GDF10P55107 478 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 SKOR1P84550 965 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 ITKQ08881 620 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 SPDYCQ5MJ68 293 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 AGBL4Q5VU57 503 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 ITPRIPL1Q6GPH6 555 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 SLC36A4Q6YBV0 504 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 FAM71DQ8N9W8 422 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 ATL2Q8NHH9 583 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 ZC3H10Q96K80 434 aaKnown RBP16.19■□□□□ 0.18
BRK1-201ENST00000530758 OMDQ99983 421 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 PCED1AQ9H1Q7 454 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 VPS45Q9NRW7 570 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 KLHL8Q9P2G9 620 aaPredicted RBP16.19■□□□□ 0.18
BRK1-201ENST00000530758 SERGEFQ9UGK8 458 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 MBD1Q9UIS9 605 aaPredicted RBP16.19■□□□□ 0.18
BRK1-201ENST00000530758 PCDHGC4Q9Y5F7 938 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 GVINP1Q7Z2Y8 2422 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 SPAG17Q6Q759 2223 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 ABCA7Q8IZY2 2146 aa16.19■□□□□ 0.18
BRK1-201ENST00000530758 PLRG1O43660 514 aaKnown RBP16.18■□□□□ 0.18
BRK1-201ENST00000530758 RNASEH2AO75792 299 aaKnown RBP16.18■□□□□ 0.18
BRK1-201ENST00000530758 RPP40O75818 363 aaKnown RBP16.18■□□□□ 0.18
BRK1-201ENST00000530758 PRLP01236 227 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 EPOP01588 193 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 ADRB3P13945 408 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 NFKB1P19838 968 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 COILP38432 576 aaPredicted RBP16.18■□□□□ 0.18
BRK1-201ENST00000530758 NEK3P51956 506 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 TAS2R38P59533 333 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 RPL26P61254 145 aaKnown RBP16.18■□□□□ 0.18
BRK1-201ENST00000530758 POLR2LP62875 67 aaKnown RBP16.18■□□□□ 0.18
BRK1-201ENST00000530758 LMNB2Q03252 620 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 TRAF2Q12933 501 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 SNX1Q13596 522 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 UGP2Q16851 508 aa16.18■□□□□ 0.18
BRK1-201ENST00000530758 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms