RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 DRGXA6NNA5 263 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 C16orf96A6NNT2 1141 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 DAB1O75553 588 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 F9P00740 461 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 RPLP0P05388 317 aaKnown RBP9.13□□□□□ -0.95
VPS11-203ENST00000529545 HGFP14210 728 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 CCKBRP32239 447 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 EIF4A3P38919 411 aaKnown RBP9.13□□□□□ -0.95
VPS11-203ENST00000529545 USP8P40818 1118 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 PPP1R2P41236 205 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 MMP16P51512 607 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 CCL7P80098 99 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 TLE1Q04724 770 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 UBAP2LQ14157 1087 aaKnown RBP9.13□□□□□ -0.95
VPS11-203ENST00000529545 TBR1Q16650 682 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 ZNF805Q5CZA5 627 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 TPRG1LQ5T0D9 272 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 TMEM164Q5U3C3 297 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 MACC1Q6ZN28 852 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 PARS2Q7L3T8 475 aaKnown RBP9.13□□□□□ -0.95
VPS11-203ENST00000529545 ENOSF1Q7L5Y1 443 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 B3GNT8Q7Z7M8 397 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 GKN2Q86XP6 184 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 SDR16C5Q8N3Y7 309 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 OR7D4Q8NG98 312 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 SMARCE1Q969G3 411 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 DHTKD1Q96HY7 919 aaPredicted RBP9.13□□□□□ -0.95
VPS11-203ENST00000529545 FAM81BQ96LP2 452 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 C1orf74Q96LT6 269 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 CMKLR1Q99788 373 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 CLPBQ9H078 707 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 LRRN3Q9H3W5 708 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 GEMIN8Q9NWZ8 242 aaKnown RBP9.13□□□□□ -0.95
VPS11-203ENST00000529545 MPP6Q9NZW5 540 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 AKAP7Q9P0M2 348 aaPredicted RBP9.13□□□□□ -0.95
VPS11-203ENST00000529545 HOOK1Q9UJC3 728 aaKnown RBP9.13□□□□□ -0.95
VPS11-203ENST00000529545 STAP1Q9ULZ2 295 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 GPR34Q9UPC5 381 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 LOXL2Q9Y4K0 774 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 ATP6V1DQ9Y5K8 247 aa9.13□□□□□ -0.95
VPS11-203ENST00000529545 TMEM110-MUSTN1A8MSY1 372 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 SRGAP2O75044 1071 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 ZNF821O75541 412 aaPredicted RBP9.12□□□□□ -0.95
VPS11-203ENST00000529545 TM7SF2O76062 418 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 RASGRP1O95267 797 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 GP1BBP13224 206 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 CD82P27701 267 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 HTR1BP28222 390 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 ETFBP38117 255 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 CXCR3P49682 368 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 SULT1E1P49888 294 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 MAPK10P53779 464 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 GEMIN4P57678 1058 aaKnown RBP9.12□□□□□ -0.95
VPS11-203ENST00000529545 SNRPD1P62314 119 aaKnown RBP9.12□□□□□ -0.95
VPS11-203ENST00000529545 SLC6A3Q01959 620 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 DEUP1Q05D60 604 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 SRSF6Q13247 344 aaKnown RBP9.12□□□□□ -0.95
VPS11-203ENST00000529545 MORC3Q14149 939 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 POLD3Q15054 466 aaPredicted RBP9.12□□□□□ -0.95
VPS11-203ENST00000529545 FAM183BPQ6ZVS7 135 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 SLC26A9Q7LBE3 791 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 TTC7BQ86TV6 843 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 VASH2Q86V25 355 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 HID1Q8IV36 788 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 KYQ8NBH2 561 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 ATL2Q8NHH9 583 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 PCDH19Q8TAB3 1148 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 CXorf40AQ8TE69 158 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 ISG20Q96AZ6 181 aaKnown RBP9.12□□□□□ -0.95
VPS11-203ENST00000529545 CENPTQ96BT3 561 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 CPXM1Q96SM3 734 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 OSBPL1AQ9BXW6 950 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 EDEM3Q9BZQ6 932 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 TM6SF2Q9BZW4 377 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 INTS2Q9H0H0 1204 aaKnown RBP9.12□□□□□ -0.95
VPS11-203ENST00000529545 ADNPQ9H2P0 1102 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 GOLPH3LQ9H4A5 285 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 PIGVQ9NUD9 493 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 ARHGEF38Q9NXL2 777 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS11-203ENST00000529545 HPCAL4Q9UM19 191 aa9.12□□□□□ -0.95
VPS11-203ENST00000529545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS11-203ENST00000529545 AHCTF1Q8WYP5 2266 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 PRAMEF33A0A0G2JMD5 474 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 A0A1W2PQC6 194 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 BICDL2A1A5D9 508 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 GOLGA6L4A6NEF3 574 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 KRIT1O00522 736 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 CASC3O15234 703 aaKnown RBP9.11□□□□□ -0.95
VPS11-203ENST00000529545 PRAMEF10O60809 474 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 POP4O95707 220 aaKnown RBP9.11□□□□□ -0.95
VPS11-203ENST00000529545 GNA14O95837 355 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 UGT2B4P06133 528 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 XPAP23025 273 aaPredicted RBP9.11□□□□□ -0.95
VPS11-203ENST00000529545 KRT9P35527 623 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 IGFALSP35858 605 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 ABL2P42684 1182 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 PEX5P50542 639 aa9.11□□□□□ -0.95
VPS11-203ENST00000529545 ATP1A2P50993 1020 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms