RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 HOXA7P31268 230 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 GRK5P34947 590 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 ARHGAP25P42331 645 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 BTDP43251 543 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 SLC37A1P57057 533 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 ACTR2P61160 394 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 UBXN2AP68543 259 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 TFCP2Q12800 502 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 RAPGEF1Q13905 1077 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 KPNB1Q14974 876 aaKnown RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 FAM110CQ1W6H9 321 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 ANKRD40Q6AI12 368 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 C11orf87Q6NUJ2 197 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 MIS18BP1Q6P0N0 1132 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 SLC2A7Q6PXP3 512 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 ATF7IPQ6VMQ6 1270 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 RTL10Q7L3V2 364 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 CNGA4Q8IV77 575 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 FOXP4Q8IVH2 680 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 PTGR2Q8N8N7 351 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 RAET1EQ8TD07 263 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 DENND1AQ8TEH3 1009 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 WIPF2Q8TF74 440 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 ZFPM2Q8WW38 1151 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 MAP4K1Q92918 833 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 RILPL2Q969X0 211 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 KTI12Q96EK9 354 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 HTATIP2Q9BUP3 242 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 TM2D2Q9BX73 214 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 PRSS22Q9GZN4 317 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 TXNRD2Q9NNW7 524 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 DDX4Q9NQI0 724 aaKnown RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 ASNSD1Q9NWL6 643 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 HMG20BQ9P0W2 317 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 PI4KBQ9UBF8 816 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 PA2G4Q9UQ80 394 aaKnown RBP5.2□□□□□ -1.58
CSDE1-212ENST00000529046 RCE1Q9Y256 329 aa5.2□□□□□ -1.58
CSDE1-212ENST00000529046 BRCA2P51587 3418 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-212ENST00000529046 KCNU1A8MYU2 1149 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 E7EVH7 732 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 HNRNPRO43390 633 aaKnown RBP5.19□□□□□ -1.58
CSDE1-212ENST00000529046 BCAR3O75815 825 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 CNTN5O94779 1100 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 BAG3O95817 575 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 ENO1P06733 434 aaKnown RBP5.19□□□□□ -1.58
CSDE1-212ENST00000529046 PTGER1P34995 402 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 HSF1Q00613 529 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 PRKCZQ05513 592 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 G3BP1Q13283 466 aaKnown RBP eCLIP5.19□□□□□ -1.588e-8■□□□□ 10.6
CSDE1-212ENST00000529046 SEMA3AQ14563 771 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 TAF5Q15542 800 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 CYP26C1Q6V0L0 522 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 RBM44Q6ZP01 1051 aaKnown RBP5.19□□□□□ -1.58
CSDE1-212ENST00000529046 RRAGAQ7L523 313 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 FTSJ3Q8IY81 847 aaKnown RBP5.19□□□□□ -1.58
CSDE1-212ENST00000529046 ADPRHL1Q8NDY3 354 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 OR52N4Q8NGI2 321 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 CLEC4CQ8WTT0 213 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 HERVK_113Q902F9 699 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 C3orf49Q96BT1 292 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 NAF1Q96HR8 494 aaKnown RBP5.19□□□□□ -1.58
CSDE1-212ENST00000529046 GPR78Q96P69 363 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 FCRL5Q96RD9 977 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 EFHD1Q9BUP0 239 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 PRO3102Q9H379 93 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 SFXN1Q9H9B4 322 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 MORF4L1Q9UBU8 362 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 KCND3Q9UK17 655 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 RAB21Q9UL25 225 aa5.19□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3DA0A087WVF3 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3IA0A087WXS9 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3EA0A087X179 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 CYP2D7A0A087X1C5 515 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3KA0A087X1G2 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3BA6NDS4 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3FA6NER0 549 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3LB9A6J9 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TNPO2O14787 897 aaKnown RBP5.18□□□□□ -1.58
CSDE1-212ENST00000529046 ASNSP08243 561 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 CNPP09543 421 aaKnown RBP5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3HP0C7X1 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 CCL5P13501 91 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 CHN1P15882 459 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TGM2P21980 687 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 RPS6KB1P23443 525 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 MMP13P45452 471 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 RCAN1P53805 252 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 DAZAP2Q15038 168 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-212ENST00000529046 PFKFB3Q16875 520 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-212ENST00000529046 ADCK5Q3MIX3 580 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 CCDC158Q5M9N0 1113 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3GQ6DHY5 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3CQ6IPX1 549 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TATDN1Q6P1N9 297 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 DEF8Q6ZN54 512 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 TBC1D3Q8IZP1 549 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-212ENST00000529046 PAQR4Q8N4S7 273 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-212ENST00000529046 CSGALNACT1Q8TDX6 532 aa5.18□□□□□ -1.58
CSDE1-212ENST00000529046 U2AF1L4Q8WU68 220 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms