RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 WACQ9BTA9 647 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 TRMOQ9BU70 441 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 HIPK3Q9H422 1215 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 ACTR5Q9H9F9 607 aaPredicted RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 ZNF304Q9HCX3 659 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 Q9N2J8 555 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 THSD1Q9NS62 852 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 DECR2Q9NUI1 292 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 UPB1Q9UBR1 384 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 ARHGAP26Q9UNA1 814 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 COG5Q9UP83 839 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 RAP2CQ9Y3L5 183 aa4.15□□□□□ -1.75
CD44-219ENST00000525685 FAM208AQ9UK61 1670 aaKnown RBP4.15□□□□□ -1.75
CD44-219ENST00000525685 ZMYM2Q9UBW7 1377 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 LRRC37A3O60309 1634 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 SMG6Q86US8 1419 aaKnown RBP4.14□□□□□ -1.75
CD44-219ENST00000525685 TSPAN4O14817 238 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 TMCC1O94876 653 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 HNRNPA1P09651 372 aaKnown RBP eCLIP4.14□□□□□ -1.75
CD44-219ENST00000525685 PAX3P23760 479 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 PSMC2P35998 433 aaKnown RBP4.14□□□□□ -1.75
CD44-219ENST00000525685 SLC16A2P36021 539 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 GPD2P43304 727 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 ME1P48163 572 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 KRTAP10-9P60411 292 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 VAMP2P63027 116 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 RPP30P78346 268 aaKnown RBP4.14□□□□□ -1.75
CD44-219ENST00000525685 ZBTB16Q05516 673 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 SRSF1Q07955 248 aaKnown RBP eCLIP4.14□□□□□ -1.75
CD44-219ENST00000525685 SMTNL2Q2TAL5 461 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 EDRF1Q3B7T1 1238 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 PLK5Q496M5 336 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 ENTPD8Q5MY95 495 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 BBS12Q6ZW61 710 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 UNC5CLQ8IV45 518 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 TCP11L2Q8N4U5 519 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 KCNH5Q8NCM2 988 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 IGFBPL1Q8WX77 278 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 HSPH1Q92598 858 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 EME1Q96AY2 570 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 KIF1BPQ96EK5 621 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 PANK3Q9H999 370 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 VEZTQ9HBM0 779 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 GGA3Q9NZ52 723 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 CD207Q9UJ71 328 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 AGO2Q9UKV8 859 aaKnown RBP4.14□□□□□ -1.75
CD44-219ENST00000525685 HSF4Q9ULV5 492 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 CNPY2Q9Y2B0 182 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 HS3ST3B1Q9Y662 390 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 RTL1A6NKG5 1358 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 NSD2O96028 1365 aa4.14□□□□□ -1.75
CD44-219ENST00000525685 BLMP54132 1417 aaPredicted RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 PARP4Q9UKK3 1724 aaKnown RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 RGPD2P0DJD1 1756 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 TRBV5-3A0A0A0MS03 114 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 IKBKBO14920 756 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 HOXC11O43248 304 aaPredicted RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 TULP3O75386 442 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 NEURL1O76050 574 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 TMEM191BP0C7N4 346 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 CD72P21854 359 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 RFC1P35251 1148 aaPredicted RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 ALDH7A1P49419 539 aaKnown RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 POLGP54098 1239 aaPredicted RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 TMPRSS3P57727 454 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 G3BP1Q13283 466 aaKnown RBP eCLIP4.13□□□□□ -1.75
CD44-219ENST00000525685 MTX1Q13505 466 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 FHL1Q13642 323 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 TWIST1Q15672 202 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 SLC4A8Q2Y0W8 1093 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 JAKMIP3Q5VZ66 844 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 RETSATQ6NUM9 610 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 TRAPPC11Q7Z392 1133 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 WDR5BQ86VZ2 330 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 CHD1LQ86WJ1 897 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 HEATR4Q86WZ0 1026 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 CAMK1DQ8IU85 385 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 FAM217AQ8IXS0 508 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 TMEM199Q8N511 208 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 SLC25A41Q8N5S1 370 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 EXD3Q8N9H8 876 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 LRRC57Q8N9N7 239 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 RFWD2Q8NHY2 731 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 TMEM174Q8WUU8 243 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 FAR1Q8WVX9 515 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 HTRA1Q92743 480 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 COG3Q96JB2 828 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 VCPIP1Q96JH7 1222 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 TEFMQ96QE5 360 aaKnown RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 SEC62Q99442 399 aaKnown RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 FOXP1Q9H334 677 aaPredicted RBP4.13□□□□□ -1.75
CD44-219ENST00000525685 SLC32A1Q9H598 525 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 TASP1Q9H6P5 420 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 WASH6PQ9NQA3 447 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 ENTPD7Q9NQZ7 604 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 SLC22A11Q9NSA0 550 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 POT1Q9NUX5 634 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 IRAK4Q9NWZ3 460 aa4.13□□□□□ -1.75
CD44-219ENST00000525685 IL1RAPL1Q9NZN1 696 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms