RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 IFT43Q96FT9 208 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ZNF419Q96HQ0 510 aaPredicted RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 ZNF333Q96JL9 665 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 B3GALT6Q96L58 329 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 PSKH2Q96QS6 385 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 C19orf43Q9BQ61 176 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 VN1R3Q9BXE9 311 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 C11orf49Q9H6J7 331 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CYP4F11Q9HBI6 524 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ARHGEF3Q9NR81 526 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CHRAC1Q9NRG0 131 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 MRPL17Q9NRX2 175 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 PIH1D1Q9NWS0 290 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 UBP1Q9NZI7 540 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 HCSTQ9UBK5 93 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 LSM7Q9UK45 103 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 FBXO5Q9UKT4 447 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 APOBEC2Q9Y235 224 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 VPS9D1Q9Y2B5 631 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ATP11BQ9Y2G3 1177 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 TBC1D30Q9Y2I9 924 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 PCDHB12Q9Y5F1 795 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 INSL5Q9Y5Q6 135 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 DENND4CQ5VZ89 1909 aa7.52□□□□□ -1.2
CASP4-204ENST00000524843 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 CCDC195A0A1B0GUA6 201 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 MROH6A6NGR9 719 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 SLCO1B7G3V0H7 640 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 J3KR12 359 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 PRRG1O14668 218 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 PFDN6O15212 129 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ADAM12O43184 909 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 KDELR3O43731 214 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 MGRN1O60291 552 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 TRIM13O60858 407 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 UPP2O95045 317 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 VAPBO95292 243 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 CRTAMO95727 393 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 FGF19O95750 216 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 TBX18O95935 607 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 C1RP00736 705 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 TIMP1P01033 207 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 SERPINA6P08185 405 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 MMP2P08253 660 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 HMBSP08397 361 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ATXN1LP0C7T5 689 aaKnown RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 RALBP11234 206 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 CPA3P15088 417 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 TPH1P17752 444 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 PSMA3P25788 255 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ARNTP27540 789 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 PTPN4P29074 926 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 CDC25CP30307 473 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 SLC1A2P43004 574 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 MAPK8P45983 427 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 GJA8P48165 433 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 LEPRP48357 1165 aaKnown RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 SLC1A6P48664 564 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 PRSS12P56730 875 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ABCE1P61221 599 aaKnown RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 NAA20P61599 178 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 PRAMEP78395 509 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 DSC2Q02487 901 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ITKQ08881 620 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 SLC10A7Q0GE19 358 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ZNF177Q13360 481 aaPredicted RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 OLIG2Q13516 323 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 GRM3Q14832 879 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 SNCBQ16143 134 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 LIPMQ5VYY2 423 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 FAM45BPQ6NSW5 357 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 MRNIPQ6NTE8 343 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ESRP1Q6NXG1 681 aaKnown RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 AFTPHQ6ULP2 937 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 CES3Q6UWW8 571 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 RAPH1Q70E73 1250 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 TAS1R1Q7RTX1 841 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 CMC1Q7Z7K0 106 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 TBC1D1Q86TI0 1168 aaPredicted RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 MFN1Q8IWA4 741 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 SUGP1Q8IWZ8 645 aaKnown RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 FAM217AQ8IXS0 508 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ELMOD1Q8N336 334 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 CPXM2Q8N436 756 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 AFAP1L2Q8N4X5 818 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 ZNF557Q8N988 423 aaPredicted RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 ZNF784Q8NCA9 323 aaPredicted RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 GPR150Q8NGU9 434 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 OR6Y1Q8NGX8 325 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 RFWD2Q8NHY2 731 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 TTC8Q8TAM2 541 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 FAM45AQ8TCE6 357 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 BRSK1Q8TDC3 778 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 GPR152Q8TDT2 470 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 STYXQ8WUJ0 223 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 PDCD6IPQ8WUM4 868 aaKnown RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 PRICKLE1Q96MT3 831 aaPredicted RBP7.52□□□□□ -1.21
CASP4-204ENST00000524843 GCNAQ96QF7 691 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 HS3ST6Q96QI5 342 aa7.52□□□□□ -1.21
CASP4-204ENST00000524843 AGAP2Q99490 1192 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms