RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 TUBGCP2Q9BSJ2 902 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 PINK1Q9BXM7 581 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 FAM207AQ9NSI2 230 aaPredicted RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 SRPRBQ9Y5M8 271 aaKnown RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 AUP1Q9Y679 476 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 DEPDC5O75140 1603 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 A8MUA0 341 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 L7N2F9 121 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 PDHXO00330 501 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 CIDEAO60543 219 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 PROS1P07225 676 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 YES1P07947 543 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 MX2P20592 715 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 EEF1DP29692 281 aaKnown RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 PRKAA2P54646 552 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 BNC1Q01954 994 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TEKQ02763 1124 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TEFQ10587 303 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 ZMYND11Q15326 602 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TYSND1Q2T9J0 566 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 THEM4Q5T1C6 240 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 PDSS1Q5T2R2 415 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 CYB5RLQ6IPT4 315 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 CASC4Q6P4E1 433 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TXNDC11Q6PKC3 985 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 RAB11FIP2Q7L804 512 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 DPP10Q8N608 796 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 SNX31Q8N9S9 440 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 MCUQ8NE86 351 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 OR4D10Q8NGI6 311 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 OR52H1Q8NGJ2 320 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 SYN2Q92777 582 aaPredicted RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 ARMC5Q96C12 935 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 ARHGEF26Q96DR7 871 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TOX2Q96NM4 488 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 NUDT16L1Q9BRJ7 211 aaKnown RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 CCM2Q9BSQ5 444 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 OSBPL11Q9BXB4 747 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TMEM120AQ9BXJ8 343 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 SLC12A5Q9H2X9 1139 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 CDC42EP4Q9H3Q1 356 aaKnown RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 C20orf96Q9NUD7 363 aaPredicted RBP8.37□□□□□ -1.07
HMGB4-204ENST00000522796 SMOXQ9NWM0 555 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 WWOXQ9NZC7 414 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 SLC27A5Q9Y2P5 690 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 DGKBQ9Y6T7 804 aa8.37□□□□□ -1.07
HMGB4-204ENST00000522796 TSPOAP1O95153 1857 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 F6X3S4 739 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ZBTB5O15062 677 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 SMPD2O60906 423 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 BCAS1O75363 584 aaPredicted RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 MED24O75448 989 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ADH1CP00326 375 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 SERPINB2P05120 415 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ENO1P06733 434 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ANXA6P08133 673 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ENO3P13929 434 aaPredicted RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 SLC15A1P46059 708 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 EIF3EP60228 445 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 CLCQ05315 142 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 RAB39AQ14964 217 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 CLCA4Q14CN2 919 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 FASTKD3Q14CZ7 662 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 C1orf185Q5T7R7 199 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 RAB12Q6IQ22 244 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 RNF180Q86T96 592 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 FAM178BQ8IXR5 827 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 PARP8Q8N3A8 854 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ARFGAP1Q8N6T3 406 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 TPCN2Q8NHX9 752 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 TUBGCP3Q96CW5 907 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF416Q9BWM5 594 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ABCG8Q9H221 673 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 PLSCR3Q9NRY6 295 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 IPO11Q9UI26 975 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 PSME2Q9UL46 239 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 POLIQ9UNA4 740 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 PXDNLA1KZ92 1463 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ZNFX1Q9P2E3 1918 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 KLRG2A4D1S0 409 aaPredicted RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 NCF1BA6NI72 391 aaPredicted RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 NCF1CA8MVU1 366 aaPredicted RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 SCAMP3O14828 347 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 PLD2O14939 933 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 PER2O15055 1255 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 CLDN3O15551 220 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF780AO75290 641 aaPredicted RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 KCNK2O95069 426 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 KCNH1O95259 989 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 BMP15O95972 392 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 RNF224P0DH78 156 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ABCB4P21439 1286 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 CPOXP36551 454 aa8.36□□□□□ -1.07
HMGB4-204ENST00000522796 ALDH6A1Q02252 535 aaKnown RBP8.36□□□□□ -1.07
HMGB4-204ENST00000522796 NME3Q13232 169 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms