RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 AGTR2P50052 363 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ZNF84P51523 738 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 HMGCS2P54868 508 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 SREBF2Q12772 1141 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 GAB1Q13480 694 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 WTAPQ15007 396 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CCL15Q16663 113 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 KIAA1755Q5JYT7 1200 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 LIPMQ5VYY2 423 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ISM2Q6H9L7 571 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 HIBCHQ6NVY1 386 aaPredicted RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 DHRS13Q6UX07 377 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 KYAT3Q6YP21 454 aaKnown RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 C9orf47Q6ZRZ4 202 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 RUFY3Q7L099 469 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CHST3Q7LGC8 479 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 TRAPPC11Q7Z392 1133 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ANKRD23Q86SG2 305 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 RFX6Q8HWS3 928 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 LAS2Q8IYD9 372 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 FBXL16Q8N461 479 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ADPRHL1Q8NDY3 354 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 GMCL1P1Q8NEA9 526 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 LPAR1Q92633 364 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ZNF566Q969W8 418 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 FAR2Q96K12 515 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 MARK4Q96L34 752 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ELAC2Q9BQ52 826 aaKnown RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 TMEM47Q9BQJ4 181 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 KRTAP1-5Q9BYS1 174 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ALDH8A1Q9H2A2 487 aaPredicted RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 KAT14Q9H8E8 782 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 PRDM16Q9HAZ2 1276 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 LY9Q9HBG7 655 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 MOV10Q9HCE1 1003 aaKnown RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 TMEM8AQ9HCN3 771 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ARFGAP3Q9NP61 516 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 ZCCHC17Q9NP64 241 aaKnown RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 NECTIN3Q9NQS3 549 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 TM7SF3Q9NS93 570 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 PDRG1Q9NUG6 133 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 HOXC10Q9NYD6 342 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 AGO2Q9UKV8 859 aaKnown RBP3.54□□□□□ -1.84
VPS13B-209ENST00000521559 STX8Q9UNK0 236 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 AGTPBP1Q9UPW5 1226 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 SLC45A1Q9Y2W3 748 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 PCDHB7Q9Y5E2 793 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CYP46A1Q9Y6A2 500 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 CCDC88AQ3V6T2 1871 aa3.54□□□□□ -1.84
VPS13B-209ENST00000521559 MAST2Q6P0Q8 1798 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 CCDC69A6NI79 296 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 RASA4BC9J798 803 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 PDHXO00330 501 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 NPC1O15118 1278 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 WDR46O15213 610 aaKnown RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 RASA4O43374 803 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 UGDHO60701 494 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 FGF18O76093 207 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 NDST3O95803 873 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 GLP2RO95838 553 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 TOMM40O96008 361 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 LDHAP00338 332 aaKnown RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 PDHBP11177 359 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 CPA1P15085 419 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 PECAM1P16284 738 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 TNFSF4P23510 183 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 STAT6P42226 847 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 SLC1A4P43007 532 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 SOX2P48431 317 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 GNAQP50148 359 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 RCAN1P53805 252 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 EVCP57679 992 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 LINC00205P59089 165 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 IRX3P78415 501 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 MAP2K1Q02750 393 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 DMWDQ09019 674 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 TROAPQ12815 778 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 MORC3Q14149 939 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 COG2Q14746 738 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 ANKRD1Q15327 319 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 PRTGQ2VWP7 1150 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 ARHGAP15Q53QZ3 475 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 FAM209BQ5JX69 171 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 FAM83BQ5T0W9 1011 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 WDR93Q6P2C0 686 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 SYNE3Q6ZMZ3 975 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 PIK3AP1Q6ZUJ8 805 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 B4GALNT4Q76KP1 1039 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 SRLQ86TD4 932 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 FAM160B2Q86V87 743 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 SPICE1Q8N0Z3 855 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 MORC4Q8TE76 937 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 WIPF2Q8TF74 440 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 CHURC1Q8WUH1 139 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 CENPIQ92674 756 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 SLC25A28Q96A46 364 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 TCEANC2Q96MN5 208 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 LZTS2Q9BRK4 669 aa3.53□□□□□ -1.84
VPS13B-209ENST00000521559 GATA5Q9BWX5 397 aaPredicted RBP3.53□□□□□ -1.84
VPS13B-209ENST00000521559 LRRC2Q9BYS8 371 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms