RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TACR3P29371 465 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 HOXA13P31271 388 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 PTH2RP49190 550 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 GNAQP50148 359 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 CDH8P55286 799 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 FRG1Q14331 258 aaKnown RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 DPCR1Q3MIW9 517 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAM153CQ494X1 144 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 MIDNQ504T8 468 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 GKAP1Q5VSY0 366 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 PRAMEF17Q5VTA0 474 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 PLEKHA7Q6IQ23 1121 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 AAGABQ6PD74 315 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 DLK2Q6UY11 383 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 GLDNQ6ZMI3 551 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZNF66Q6ZN08 573 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 KDELC2Q7Z4H8 507 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 GPAT4Q86UL3 456 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 LINC00346Q8IVM7 164 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 UEVLDQ8IX04 471 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 GHDCQ8N2G8 530 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 HJURPQ8NCD3 748 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 CCDC191Q8NCU4 936 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 DNAAF1Q8NEP3 725 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 GTF3C6Q969F1 213 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 CALML4Q96GE6 196 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 PGAM5Q96HS1 289 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 CLMNQ96JQ2 1002 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 C1orf74Q96LT6 269 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZMAT2Q96NC0 199 aaKnown RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 SRSF8Q9BRL6 282 aaKnown RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 H2AFJQ9BTM1 129 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 EFHD1Q9BUP0 239 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 FTOQ9C0B1 505 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 WDR26Q9H7D7 661 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 MVB12BQ9H7P6 319 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 DDX4Q9NQI0 724 aaKnown RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 ENTPD7Q9NQZ7 604 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 SLC6A13Q9NSD5 602 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 C5AR2Q9P296 337 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 PLEKHB1Q9UF11 243 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 FBXL17Q9UF56 701 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 DHDHQ9UQ10 334 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 LSM4Q9Y4Z0 139 aaKnown RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 RAI2Q9Y5P3 530 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 A0A1W2PRQ8 180 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 HSPB2A8KAH6 182 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 USP17L23D6RBM5 183 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 UBE2Q2LH0YL09 131 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 H7C0S8 307 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 SNAP23O00161 211 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 TCERG1O14776 1098 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 ADAMDEC1O15204 470 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 RNMTO43148 476 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 MSI1O43347 362 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 HCRTR2O43614 444 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 ATG13O75143 517 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 PROP1O75360 226 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 MT-CYBP00156 380 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 CLTBP09497 229 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 UNGP13051 313 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 TBXAS1P24557 533 aaPredicted RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 MCM3P25205 808 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 KLRC2P26717 231 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 ACADLP28330 430 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 CHRNA5P30532 468 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 NNMTP40261 264 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 EIF2DP41214 584 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 SKIV2L2P42285 1042 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 CYP2J2P51589 502 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 PMS2P54278 862 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 INHBEP58166 350 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 TUBA4AP68366 448 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 HSF1Q00613 529 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 LAMB3Q13751 1172 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 CRYMQ14894 314 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 HSPB2Q16082 182 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 COL28A1Q2UY09 1125 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 CC2D1BQ5T0F9 858 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 QSOX2Q6ZRP7 698 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 TSPAN33Q86UF1 283 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZNF575Q86XF7 245 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 GPSM1Q86YR5 675 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZDHHC23Q8IYP9 409 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 PNLDC1Q8NA58 520 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 SEMA6DQ8NFY4 1073 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 DPF1Q92782 380 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 LRRC59Q96AG4 307 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 YME1L1Q96TA2 773 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 KCNN2Q9H2S1 579 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 KAT14Q9H8E8 782 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 LTB4R2Q9NPC1 389 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 DECR2Q9NUI1 292 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 SETD4Q9NVD3 440 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 CTNNAL1Q9UBT7 734 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 MORF4L1Q9UBU8 362 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 SEC63Q9UGP8 760 aaKnown RBP3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 LAMP3Q9UQV4 416 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 TMEM5Q9Y2B1 443 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms