RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 HCFC1R1Q9NWW0 138 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 CFDP1Q9UEE9 299 aaPredicted RBP4.31□□□□□ -1.72
SQLE-204ENST00000520493 KIR2DS5A0A0G2JLQ3 304 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 TMEM272A0A1B0GTI8 110 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 PABPN1LA6NDY0 278 aaKnown RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 TTC36A6NLP5 189 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 ZNF814B7Z6K7 855 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 KIR2DS3K7RE56 304 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 TAF4O00268 1085 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 SYN3O14994 580 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 PER2O15055 1255 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 KIF1CO43896 1103 aaKnown RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 DNTTP04053 509 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 LYL1P12980 280 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 PORP16435 677 aaPredicted RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 CIITAP33076 1130 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 CPOXP36551 454 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 PSMB10P40306 273 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 CDKN2AP42771 156 aaKnown RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 RPS3AP61247 264 aaKnown RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 EFNB1P98172 346 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 AIMP2Q13155 320 aaKnown RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 PTGR1Q14914 329 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 RILPL1Q5EBL4 403 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 C17orf99Q6UX52 265 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 MDGA2Q7Z553 956 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 KLBQ86Z14 1044 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 CPXM2Q8N436 756 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 SETD9Q8NE22 299 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 FAM149B1Q96BN6 582 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 ZMAT2Q96NC0 199 aaKnown RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 MAP7D2Q96T17 732 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 MPHOSPH8Q99549 860 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 BAG1Q99933 345 aaPredicted RBP4.3□□□□□ -1.72
SQLE-204ENST00000520493 SLF1Q9BQI6 1058 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 ITPAQ9BY32 194 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.3□□□□□ -1.72
SQLE-204ENST00000520493 SLC25A18Q9H1K4 315 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 HIPK2Q9H2X6 1198 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 IL1RAPL1Q9NZN1 696 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 GIMAP2Q9UG22 337 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 CDH22Q9UJ99 828 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 PCDHA12Q9UN75 941 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 SNX8Q9Y5X2 465 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 PIAS3Q9Y6X2 628 aa4.3□□□□□ -1.72
SQLE-204ENST00000520493 TTC3P53804 2025 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 OR6C68A6NDL8 312 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 C17orf100A8MU93 164 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 AP3D1O14617 1153 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 STRNO43815 780 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 EPN2O95208 641 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 LCKP06239 509 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 ZNF8P17098 575 aaPredicted RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 TM4SF1P30408 202 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 MAPK4P31152 587 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 ACTN2P35609 894 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 GABRB2P47870 512 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 HARS2P49590 506 aaKnown RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 KRT83P78385 493 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 RHAGQ02094 409 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 CREB5Q02930 508 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 CALD1Q05682 793 aaKnown RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 PPATQ06203 517 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 DCTN2Q13561 401 aaKnown RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 IL13RA2Q14627 380 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 GSTA3Q16772 222 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 C6orf10Q5SRN2 563 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 C10orf76Q5T2E6 689 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 NAPEPLDQ6IQ20 393 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 SLC30A6Q6NXT4 461 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 TMEM81Q6P7N7 255 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 SLC30A9Q6PML9 568 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 SARM1Q6SZW1 724 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 PRPF39Q86UA1 669 aaKnown RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 VPS52Q8N1B4 723 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 ARL14EPQ8N8R7 260 aaPredicted RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 FAM110DQ8TAY7 271 aaPredicted RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 HSPH1Q92598 858 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 LPAR1Q92633 364 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 KLHL29Q96CT2 875 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 KIF1BPQ96EK5 621 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 CCDC34Q96HJ3 373 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 FEM1CQ96JP0 617 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 CLMNQ96JQ2 1002 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 TEFMQ96QE5 360 aaKnown RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 PIMREGQ9BSJ6 248 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 TXLNGYQ9BZA5 131 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 TASP1Q9H6P5 420 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 MRPL44Q9H9J2 332 aaKnown RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 EHD2Q9NZN4 543 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 HDAC6Q9UBN7 1215 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 ADD3Q9UEY8 706 aaKnown RBP4.29□□□□□ -1.72
SQLE-204ENST00000520493 DHDHQ9UQ10 334 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 TNFSF13BQ9Y275 285 aa4.29□□□□□ -1.72
SQLE-204ENST00000520493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.29□□□□□ -1.72
SQLE-204ENST00000520493 hCG_1807616A0A1W2PRN6 198 aa4.28□□□□□ -1.72
SQLE-204ENST00000520493 LACTBL1A8MY62 500 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms