RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 ZNF449Q6P9G9 518 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 STRA8Q7Z7C7 330 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 GDPD5Q8WTR4 605 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 CHMP6Q96FZ7 201 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 TLE6Q9H808 572 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 TREX1Q9NSU2 369 aa23.59■■□□□ 1.37
SLIT3-204ENST00000518140 FCF1Q9Y324 198 aaKnown RBP23.59■■□□□ 1.37
SLIT3-204ENST00000518140 H0YHG0 523 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 DRD4P21917 467 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 DDX6P26196 483 aaKnown RBP eCLIP23.58■■□□□ 1.37
SLIT3-204ENST00000518140 ACTN3Q08043 901 aaPredicted RBP23.58■■□□□ 1.37
SLIT3-204ENST00000518140 NAB1Q13506 487 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 LVRNQ6Q4G3 990 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 VN1R2Q8NFZ6 395 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 IFT43Q96FT9 208 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 ATXN7L3BQ96GX2 97 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 SGSM3Q96HU1 749 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 SLC13A1Q9BZW2 595 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 ZDHHC7Q9NXF8 308 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 PRKAG3Q9UGI9 489 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 CHKBQ9Y259 395 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 KCTD3Q9Y597 815 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 MYOFQ9NZM1 2061 aa23.58■■□□□ 1.37
SLIT3-204ENST00000518140 PRRC2BQ5JSZ5 2229 aaKnown RBP23.58■■□□□ 1.36
SLIT3-204ENST00000518140 INSIG1O15503 277 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 TOP3BO95985 862 aaKnown RBP23.58■■□□□ 1.36
SLIT3-204ENST00000518140 ALDOAP04075 364 aaKnown RBP23.58■■□□□ 1.36
SLIT3-204ENST00000518140 ITGA2BP08514 1039 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 PIRTP0C851 137 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 GP5P40197 560 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 NEK3P51956 506 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 TMC5Q6UXY8 1006 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 ALKBH8Q96BT7 664 aaKnown RBP23.58■■□□□ 1.36
SLIT3-204ENST00000518140 MTBPQ96DY7 904 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 FEM1CQ96JP0 617 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 SMIM14Q96QK8 99 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 TRIB3Q96RU7 358 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 CPNE1Q99829 537 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 LHX3Q9UBR4 397 aa23.58■■□□□ 1.36
SLIT3-204ENST00000518140 INTS6Q9UL03 887 aaKnown RBP23.58■■□□□ 1.36
SLIT3-204ENST00000518140 MIA3Q5JRA6 1907 aa23.57■■□□□ 1.36
SLIT3-204ENST00000518140 TCP11X1B4DZS4 312 aa23.57■■□□□ 1.36
SLIT3-204ENST00000518140 GTF2A1P52655 376 aaPredicted RBP23.57■■□□□ 1.36
SLIT3-204ENST00000518140 MPP7Q5T2T1 576 aa23.57■■□□□ 1.36
SLIT3-204ENST00000518140 ARID3BQ8IVW6 561 aaPredicted RBP23.57■■□□□ 1.36
SLIT3-204ENST00000518140 FIBINQ8TAL6 211 aa23.57■■□□□ 1.36
SLIT3-204ENST00000518140 APOPT1Q96IL0 206 aa23.57■■□□□ 1.36
SLIT3-204ENST00000518140 MRM3Q9HC36 420 aaKnown RBP23.57■■□□□ 1.36
SLIT3-204ENST00000518140 SCUBE2Q9NQ36 999 aa23.57■■□□□ 1.36
SLIT3-204ENST00000518140 PCDHGC4Q9Y5F7 938 aa23.57■■□□□ 1.36
SLIT3-204ENST00000518140 RFXAPO00287 272 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 CCL22O00626 93 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 SMAD6O43541 496 aaKnown RBP23.56■■□□□ 1.36
SLIT3-204ENST00000518140 GMPRP36959 345 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 SF3A3Q12874 501 aaKnown RBP eCLIP23.56■■□□□ 1.36
SLIT3-204ENST00000518140 TIFABQ6ZNK6 161 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 PNPLA1Q8N8W4 532 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 ACVR1CQ8NER5 493 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 PTCD2Q8WV60 388 aaKnown RBP23.56■■□□□ 1.36
SLIT3-204ENST00000518140 TXNDC16Q9P2K2 825 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 C5orf42Q9H799 3197 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 PRLP01236 227 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 PDHA1P08559 390 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 VIMP08670 466 aaKnown RBP23.56■■□□□ 1.36
SLIT3-204ENST00000518140 GABRB3P28472 473 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 PTPRCAPQ14761 206 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 ATXN7L2Q5T6C5 722 aaPredicted RBP23.56■■□□□ 1.36
SLIT3-204ENST00000518140 GRTP1Q5TC63 336 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 RNF43Q68DV7 783 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 PDPK2PQ6A1A2 396 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 ASTLQ6HA08 431 aaPredicted RBP23.56■■□□□ 1.36
SLIT3-204ENST00000518140 CCDC121Q6ZUS5 278 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 DENND6AQ8IWF6 608 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 DCAF4L2Q8NA75 395 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 SEC16BQ96JE7 1060 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 LMLNQ96KR4 655 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 LRRC3BQ96PB8 259 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 RBBP8Q99708 897 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 PCMTD2Q9NV79 361 aa23.56■■□□□ 1.36
SLIT3-204ENST00000518140 MTO1Q9Y2Z2 717 aaKnown RBP23.56■■□□□ 1.36
SLIT3-204ENST00000518140 MRPS23Q9Y3D9 190 aaKnown RBP23.56■■□□□ 1.36
SLIT3-204ENST00000518140 HEATR9A2RTY3 570 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 TPP1O14773 563 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 BUD23O43709 281 aaKnown RBP23.55■■□□□ 1.36
SLIT3-204ENST00000518140 ZWINTO95229 277 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 EPOP01588 193 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 CTBP1Q13363 440 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 ZNF77Q15935 545 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 TSTD2Q5T7W7 516 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 NDUFAF2Q8N183 169 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 LEMD2Q8NC56 503 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 SMG7Q92540 1137 aaKnown RBP23.55■■□□□ 1.36
SLIT3-204ENST00000518140 SPOCK2Q92563 424 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 CABS1Q96KC9 395 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 NUDCD1Q96RS6 583 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 SRPK1Q96SB4 655 aaKnown RBP23.55■■□□□ 1.36
SLIT3-204ENST00000518140 MCMBPQ9BTE3 642 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 ACTR5Q9H9F9 607 aaPredicted RBP23.55■■□□□ 1.36
SLIT3-204ENST00000518140 PIDD1Q9HB75 910 aa23.55■■□□□ 1.36
SLIT3-204ENST00000518140 GGT7Q9UJ14 662 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms