RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 SGSHP51688 502 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 KPNA2P52292 529 aaKnown RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 AP1S1P61966 158 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 PRAMEP78395 509 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 CCDC153Q494R4 210 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SIRPB2Q5JXA9 342 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 PRPF38BQ5VTL8 546 aaKnown RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 PIGWQ7Z7B1 504 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 UNC5BQ8IZJ1 945 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 BRSK1Q8TDC3 778 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 FEM1AQ9BSK4 669 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 FGFR1OP2Q9NVK5 253 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 USP15Q9Y4E8 981 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 HELZP42694 1942 aaKnown RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SLC9A3R1O14745 358 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 KLF11O14901 512 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SNX3O60493 162 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 CLASP2O75122 1294 aaKnown RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 VAPBO95292 243 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 ATXN1LP0C7T5 689 aaKnown RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 CR2P20023 1033 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 ETV4P43268 484 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 MAGEA12P43365 314 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SERPINB4P48594 390 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SCNN1BP51168 640 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 HNRNPH2P55795 449 aaKnown RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 RNF43Q68DV7 783 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SPATA21Q7Z572 469 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 FIBINQ8TAL6 211 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SHKBP1Q8TBC3 707 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SH3RF2Q8TEC5 729 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SLC22A17Q8WUG5 538 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 STYXQ8WUJ0 223 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 VPS39Q96JC1 886 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 GPR22Q99680 433 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SLC46A2Q9BY10 475 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SLC13A1Q9BZW2 595 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 MANSC1Q9H8J5 431 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 SNX15Q9NRS6 342 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 HACD3Q9P035 362 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 TLK1Q9UKI8 766 aa11.9□□□□□ -0.5
SPIDR-203ENST00000517693 CORO1CQ9ULV4 474 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-203ENST00000517693 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 MROH6A6NGR9 719 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 PFDN6O15212 129 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 IL1BP01584 269 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ALDOAP04075 364 aaKnown RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 COL6A2P12110 1019 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 CSKP41240 450 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 CHRNA4P43681 627 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ARCN1P48444 511 aaKnown RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 CD151P48509 253 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ERVK-21P61565 698 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 RHOAP61586 193 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ARF5P84085 180 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 GPM6BQ13491 265 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ZKSCAN8Q15776 578 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 CNGA3Q16281 694 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 FSTL4Q6MZW2 842 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 NEPROQ6NW34 567 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ESRP1Q6NXG1 681 aaKnown RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 KDELC2Q7Z4H8 507 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 BBS7Q8IWZ6 715 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 DCLK2Q8N568 766 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 GBP7Q8N8V2 638 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 C2CD4AQ8NCU7 369 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 OR52K2Q8NGK3 314 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ZNF75CPQ92670 426 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 PPP2R3CQ969Q6 453 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 WBP2Q969T9 261 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 TSPAN17Q96FV3 270 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ELAC2Q9BQ52 826 aaKnown RBP11.89□□□□□ -0.51
SPIDR-203ENST00000517693 MFSD1Q9H3U5 465 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 TDP1Q9NUW8 608 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 KLHL14Q9P2G3 628 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 SLC17A7Q9P2U7 560 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 VPS51Q9UID3 782 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 PHTF1Q9UMS5 762 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 ARL2BPQ9Y2Y0 163 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 PSAT1Q9Y617 370 aa11.89□□□□□ -0.51
SPIDR-203ENST00000517693 HMX2A2RU54 273 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 C2orf81A6NN90 581 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 EDF1O60869 148 aaKnown RBP11.88□□□□□ -0.51
SPIDR-203ENST00000517693 ZMPSTE24O75844 475 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 CRABP2P29373 138 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 CSNK1DP48730 415 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 CLCN5P51795 746 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 PLK1P53350 603 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 SLC12A2P55011 1212 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 RPL26P61254 145 aaKnown RBP11.88□□□□□ -0.51
SPIDR-203ENST00000517693 ACVR1Q04771 509 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 SULT2A1Q06520 285 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 DMC1Q14565 340 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 CYTH1Q15438 398 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 QPCTQ16769 361 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 ZNF470Q6ECI4 717 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 MRNIPQ6NTE8 343 aa11.88□□□□□ -0.51
SPIDR-203ENST00000517693 CCDC121Q6ZUS5 278 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms