RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 VPS4AQ9UN37 437 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 DCLK1O15075 740 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 TP73O15350 636 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 FGF19O95750 216 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ALOX12P18054 663 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 BMP7P18075 431 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 TNFSF9P41273 254 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 DEF8Q6ZN54 512 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 GCNT7Q6ZNI0 430 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 MIEF2Q96C03 454 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 NAALADL1Q9UQQ1 740 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ZNF510Q9Y2H8 683 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 MRPS17Q9Y2R5 130 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 KHDRBS3O75525 346 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 WARSP23381 471 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 CTSOP43234 321 aaPredicted RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PSMD4P55036 377 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 KCNA10Q16322 511 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PARP6Q2NL67 630 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PCID2Q5JVF3 399 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 APOBEC3HQ6NTF7 200 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 IRGCQ6NXR0 463 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 FBXO25Q8TCJ0 367 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 TCP10LQ8TDR4 215 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ARHGAP9Q9BRR9 750 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ADGRA3Q8IWK6 1321 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 CDH3P22223 829 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 TAS2R41P59536 307 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 GRB14Q14449 540 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 AMZ1Q400G9 498 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 SPATA6LQ8N4H0 392 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 RIPOR3Q96MK2 946 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 SPATA5L1Q9BVQ7 753 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ETNK2Q9NVF9 386 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 SLC24A2Q9UI40 661 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 MRTO4Q9UKD2 239 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 STBD1O95210 358 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 OR4Q2P0C623 313 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 RPL38P63173 70 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 SP2Q02086 613 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PTPRNQ16849 979 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ESRP1Q6NXG1 681 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 WDR59Q6PJI9 974 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ZNF276Q8N554 614 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 VPS35Q96QK1 796 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PDCD10Q9BUL8 212 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 SLC39A8Q9C0K1 460 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 SLC40A1Q9NP59 571 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PHPT1Q9NRX4 125 aaPredicted RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 RHBDL2Q9NX52 303 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 CD84Q9UIB8 345 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 ALPPL2P10696 532 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 FAAP100Q0VG06 881 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 INTS11Q5TA45 600 aaKnown RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 NIPA1Q7RTP0 329 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 HOMEZQ8IX15 550 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PTGR2Q8N8N7 351 aaPredicted RBP11.09□□□□□ -0.63
TRIM41-209ENST00000515834 IL12RB2Q99665 862 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 FAM105AQ9NUU6 356 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 PLAGL2Q9UPG8 496 aa11.09□□□□□ -0.63
TRIM41-209ENST00000515834 STX11O75558 287 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 LTA4HP09960 611 aaKnown RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 NT5EP21589 574 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 GLRA2P23416 452 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 LRPAP1P30533 357 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 PURAQ00577 322 aaKnown RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 XKR4Q5GH76 650 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 TMEM216Q9P0N5 145 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 PCDHAC2Q9Y5I4 1007 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 DIP2AQ14689 1571 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 A0A1W2PQH9 124 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 DNALI1O14645 258 aaPredicted RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 MAGEB3O15480 346 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 SELPP16109 830 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 SYN1P17600 705 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 TPP2P29144 1249 aaPredicted RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 MC4RP32245 332 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 DHPSP49366 369 aaPredicted RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 TOB1P50616 345 aaPredicted RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 SCRN3Q0VDG4 424 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 TTI2Q6NXR4 508 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 HERVK_113Q902F9 699 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 GPER1Q99527 375 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 VAT1Q99536 393 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 SLC38A3Q99624 504 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 FNDC11Q9BVV2 318 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 ADAM28Q9UKQ2 775 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 LOC100506127A0A0U1RQW1 187 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 PSMD11O00231 422 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 NFATC1O95644 943 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 CYP4F3Q08477 520 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 NKAPQ8N5F7 415 aaKnown RBP11.08□□□□□ -0.64
TRIM41-209ENST00000515834 TRPV3Q8NET8 790 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 EEF1AKMT1Q8WVE0 214 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 PIGKQ92643 395 aa11.08□□□□□ -0.64
TRIM41-209ENST00000515834 NELL1Q92832 810 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms