RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 HTRA2O43464 458 aaPredicted RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 PIGNO95427 931 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 MT-CYBP00156 380 aaPredicted RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 IL1BP01584 269 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 UGT2B4P06133 528 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 VPS41P49754 854 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 CCR3P51677 355 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 RPS14P62263 151 aaKnown RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 CST6Q15828 149 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 GLE1Q53GS7 698 aaKnown RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 ZNF805Q5CZA5 627 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 KDELC1Q6UW63 502 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 TMPRSS6Q8IU80 811 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 CAMK1DQ8IU85 385 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 MMAAQ8IVH4 418 aaKnown RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 ECHDC3Q96DC8 303 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 PPP1R16AQ96I34 528 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 MLPHQ9BV36 600 aaPredicted RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 TDRD1Q9BXT4 1180 aaKnown RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 SUV39H2Q9H5I1 410 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 ETNK1Q9HBU6 452 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 POLR3BQ9NW08 1133 aaPredicted RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 C2orf42Q9NWW7 574 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 DKK3Q9UBP4 350 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 SARDHQ9UL12 918 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 SCML1Q9UN30 329 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 ARIH1Q9Y4X5 557 aaPredicted RBP21.19■□□□□ 0.98
LSM6-207ENST00000515311 RAI2Q9Y5P3 530 aa21.19■□□□□ 0.98
LSM6-207ENST00000515311 TSPAN11A1L157 253 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 F5H423 210 aaPredicted RBP21.18■□□□□ 0.98
LSM6-207ENST00000515311 TRAFD1O14545 582 aaPredicted RBP21.18■□□□□ 0.98
LSM6-207ENST00000515311 ALDH1A2O94788 518 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 C5AR1P21730 350 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 ITGB7P26010 798 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 ADCY8P40145 1251 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 MAGEA6P43360 314 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 CXCL12P48061 93 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 PSMD8P48556 350 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 TRAF2Q12933 501 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 FAXCQ5TGI0 409 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 KCTD11Q693B1 232 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 CAMKK1Q8N5S9 505 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 TSTD1Q8NFU3 115 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 LRRC45Q96CN5 670 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 ERLEC1Q96DZ1 483 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 FEM1CQ96JP0 617 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 MRGPRX1Q96LB2 322 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 ERP44Q9BS26 406 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 TRIM51Q9BSJ1 452 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 RAB17Q9H0T7 212 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 EIF2B3Q9NR50 452 aaKnown RBP21.18■□□□□ 0.98
LSM6-207ENST00000515311 UBP1Q9NZI7 540 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 PCDHGC4Q9Y5F7 938 aa21.18■□□□□ 0.98
LSM6-207ENST00000515311 E7EVH7 732 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 KPNA3O00505 521 aaPredicted RBP21.17■□□□□ 0.98
LSM6-207ENST00000515311 PMPCBO75439 489 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 APBB3O95704 486 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 AP2A1O95782 977 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 EPOP01588 193 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 GABRG2P18507 467 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 NDUFV2P19404 249 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 WNT3AP56704 352 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 RPL26P61254 145 aaKnown RBP21.17■□□□□ 0.98
LSM6-207ENST00000515311 BASP1P80723 227 aaKnown RBP21.17■□□□□ 0.98
LSM6-207ENST00000515311 CFAP58Q5T655 872 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 BRAT1Q6PJG6 821 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 TAB3Q8N5C8 712 aaPredicted RBP21.17■□□□□ 0.98
LSM6-207ENST00000515311 TMEM105Q8N8V8 129 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 PRCCQ92733 491 aaPredicted RBP21.17■□□□□ 0.98
LSM6-207ENST00000515311 KLHL32Q96NJ5 620 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 TRIB3Q96RU7 358 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 LRRC1Q9BTT6 524 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 LRRC40Q9H9A6 602 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 RRAGDQ9NQL2 400 aaPredicted RBP21.17■□□□□ 0.98
LSM6-207ENST00000515311 RPL26L1Q9UNX3 145 aaKnown RBP21.17■□□□□ 0.98
LSM6-207ENST00000515311 ZDBF2Q9HCK1 2354 aa21.17■□□□□ 0.98
LSM6-207ENST00000515311 LOC285095A0A1B0GVY8 99 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 FZD6O60353 706 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 PGLSO95336 258 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 SLU7O95391 586 aaKnown RBP21.16■□□□□ 0.98
LSM6-207ENST00000515311 APRTP07741 180 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 IVDP26440 423 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 SLC8A1P32418 973 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 TUBB4BP68371 445 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 CDK16Q00536 496 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 CDK18Q07002 472 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 SFSWAPQ12872 951 aaKnown RBP21.16■□□□□ 0.98
LSM6-207ENST00000515311 PCSK7Q16549 785 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 KCTD19Q17RG1 926 aaPredicted RBP21.16■□□□□ 0.98
LSM6-207ENST00000515311 ARMC12Q5T9G4 340 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 CCDC70Q6NSX1 233 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 PDCD7Q8N8D1 485 aaKnown RBP21.16■□□□□ 0.98
LSM6-207ENST00000515311 IPMKQ8NFU5 416 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 SIPA1Q96FS4 1042 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 IFT43Q96FT9 208 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 MRGPRX2Q96LB1 330 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 FSD1LQ9BXM9 530 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 ADGRE3Q9BY15 652 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 HDAC8Q9BY41 377 aa21.16■□□□□ 0.98
LSM6-207ENST00000515311 PABPC3Q9H361 631 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms