RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 CYP4A11Q02928 519 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 RPE65Q16518 533 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 EDRF1Q3B7T1 1238 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 PLK5Q496M5 336 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 RILPL1Q5EBL4 403 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 CDC73Q6P1J9 531 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 PRSS45Q7RTY3 260 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 SLC46A3Q7Z3Q1 461 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 TADA2BQ86TJ2 420 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 FAM160B2Q86V87 743 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 RPAP2Q8IXW5 612 aaPredicted RBP4.26□□□□□ -1.73
GYPB-214ENST00000513557 CCDC105Q8IYK2 499 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 CHCHD4Q8N4Q1 142 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 TTC39CQ8N584 583 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 CADM4Q8NFZ8 388 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 NSUN4Q96CB9 384 aaKnown RBP4.26□□□□□ -1.73
GYPB-214ENST00000513557 ASB2Q96Q27 587 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 TEFMQ96QE5 360 aaKnown RBP4.26□□□□□ -1.73
GYPB-214ENST00000513557 PRAM1Q96QH2 718 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 FRG2BQ96QU4 278 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 HEMGNQ9BXL5 484 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 ATP8A2Q9NTI2 1148 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 C20orf141Q9NUB4 165 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 HCFC1R1Q9NWW0 138 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 CWC25Q9NXE8 425 aaPredicted RBP4.26□□□□□ -1.73
GYPB-214ENST00000513557 NLKQ9UBE8 527 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 ADD3Q9UEY8 706 aaKnown RBP4.26□□□□□ -1.73
GYPB-214ENST00000513557 FBXO40Q9UH90 709 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 CORO1CQ9ULV4 474 aaPredicted RBP4.26□□□□□ -1.73
GYPB-214ENST00000513557 ICKQ9UPZ9 632 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 CLDN16Q9Y5I7 305 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 NEXMIFQ5QGS0 1516 aa4.26□□□□□ -1.73
GYPB-214ENST00000513557 NPHP3Q7Z494 1330 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 NRXN3Q9Y4C0 1643 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 ARID1BQ8NFD5 2236 aaPredicted RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 A0A087X1B8 175 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 TARSL2A2RTX5 802 aaKnown RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 TTC36A6NLP5 189 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 PTGES3LE9PB15 166 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 FOXN1O15353 648 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 DKC1O60832 514 aaKnown RBP eCLIP4.25□□□□□ -1.73
GYPB-214ENST00000513557 DDAH2O95865 285 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 POU1F1P28069 291 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 CTNNA1P35221 906 aaKnown RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 PPARGP37231 505 aaPredicted RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 YPEL5P62699 121 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 ZBED6P86452 979 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 GOLGA8DPQ0D2H9 430 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 TMEM115Q12893 351 aaPredicted RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 WTAPQ15007 396 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 MED22Q15528 200 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 GSTA3Q16772 222 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 SERTAD4-AS1Q5TG53 156 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 PRAMEF17Q5VTA0 474 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 CRIP3Q6Q6R5 217 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 LRIG3Q6UXM1 1119 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 MOB3CQ70IA8 216 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 CYB5R4Q7L1T6 521 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 ENOSF1Q7L5Y1 443 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 GDPD5Q8WTR4 605 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 SMARCE1Q969G3 411 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 ATP6V1E2Q96A05 226 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 INTS12Q96CB8 462 aaKnown RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 PERPQ96FX8 193 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 ZMAT2Q96NC0 199 aaKnown RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 CENPOQ9BU64 300 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 EFHD1Q9BUP0 239 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 FTOQ9C0B1 505 aaKnown RBP eCLIP4.25□□□□□ -1.73
GYPB-214ENST00000513557 MLXIPLQ9NP71 852 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 SNTG1Q9NSN8 517 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 ARGLU1Q9NWB6 273 aaPredicted RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 GRHL1Q9NZI5 618 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 EHD2Q9NZN4 543 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 KIAA1456Q9P272 454 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 RRBP1Q9P2E9 1410 aaKnown RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 ZNF70Q9UC06 446 aaPredicted RBP4.25□□□□□ -1.73
GYPB-214ENST00000513557 ACAD8Q9UKU7 415 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 NCOA3Q9Y6Q9 1424 aa4.25□□□□□ -1.73
GYPB-214ENST00000513557 AHDC1Q5TGY3 1603 aaPredicted RBP4.24□□□□□ -1.73
GYPB-214ENST00000513557 NALCNQ8IZF0 1738 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 SETBP1Q9Y6X0 1596 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 HFM1A2PYH4 1435 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 RGS12O14924 1447 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 SETD5Q9C0A6 1442 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 CYP2D7A0A087X1C5 515 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 SLC22A23A1A5C7 686 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 SYNDIG1LA6NDD5 238 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 LIPT2A6NK58 231 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 VILLO15195 856 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 MATN3O15232 486 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 TSPAN9O75954 239 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 NHLRC4P0CG21 123 aaPredicted RBP4.24□□□□□ -1.73
GYPB-214ENST00000513557 ZNF8P17098 575 aaPredicted RBP4.24□□□□□ -1.73
GYPB-214ENST00000513557 KLRC2P26717 231 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 TM4SF1P30408 202 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 ACTN2P35609 894 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 PBX3P40426 434 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 ARSFP54793 590 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 SLC12A2P55011 1212 aa4.24□□□□□ -1.73
GYPB-214ENST00000513557 YWHAZP63104 245 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms