RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 EME1Q96AY2 570 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 AP2M1Q96CW1 435 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 GSDMCQ9BYG8 508 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 IL1RL2Q9HB29 575 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 FGRP09769 529 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 GLRBP48167 497 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 COPAP53621 1224 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 CCINQ13939 588 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 GRB14Q14449 540 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 NAA30Q147X3 362 aaPredicted RBP4.28□□□□□ -1.72
VCAN-209ENST00000513016 FUT11Q495W5 492 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 CCNI2Q6ZMN8 369 aaPredicted RBP4.28□□□□□ -1.72
VCAN-209ENST00000513016 ADCK1Q86TW2 530 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 GAS2L3Q86XJ1 694 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 CMTR2Q8IYT2 770 aaKnown RBP4.28□□□□□ -1.72
VCAN-209ENST00000513016 FNDC5Q8NAU1 212 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 SPPL2AQ8TCT8 520 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 INPP5DQ92835 1189 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 SLC35C1Q96A29 364 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 MCCC2Q9HCC0 563 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 NEUROD4Q9HD90 331 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 MAFFQ9ULX9 164 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 ANGPT4Q9Y264 503 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 ADGRB1O14514 1584 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 COL1A1P02452 1464 aaPredicted RBP4.28□□□□□ -1.72
VCAN-209ENST00000513016 A0A087X0B3 334 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 A0A1W2PQ45 241 aaPredicted RBP4.28□□□□□ -1.72
VCAN-209ENST00000513016 A0A1W2PQY0 241 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 ZBTB39O15060 712 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 ADH5P11766 374 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 ARL2P36404 184 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 SLC5A3P53794 718 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 GRIK5Q16478 980 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 VN1R5Q7Z5H4 357 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 CAMK1DQ8IU85 385 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 HID1Q8IV36 788 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 SH3RF2Q8TEC5 729 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 AZIN2Q96A70 460 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 NSL1Q96IY1 281 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 RNF157Q96PX1 679 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 SIKE1Q9BRV8 207 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 SNRNP25Q9BV90 132 aaKnown RBP4.28□□□□□ -1.72
VCAN-209ENST00000513016 EPB41L4BQ9H329 900 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 HHATLQ9HCP6 504 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 MID1IP1Q9NPA3 183 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 COPS7AQ9UBW8 275 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 TRPS1Q9UHF7 1281 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 PHTF1Q9UMS5 762 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 PCDHAC2Q9Y5I4 1007 aa4.28□□□□□ -1.72
VCAN-209ENST00000513016 C5orf60A6NFR6 353 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 AP3D1O14617 1153 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 CHADO15335 359 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 CD3EAPO15446 510 aaKnown RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 B4GALT5O43286 388 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 PAGE1O75459 146 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 C4BPBP20851 252 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 OXTRP30559 389 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 CCNFP41002 786 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 BUD31P41223 144 aaPredicted RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 MRPL28Q13084 256 aaKnown RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 LDLRAP1Q5SW96 308 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 LCLAT1Q6UWP7 414 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 CASP12Q6UXS9 341 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 ZNF571Q7Z3V5 609 aaPredicted RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 GATAD2AQ86YP4 633 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 ALLCQ8N6M5 410 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 TC2NQ8N9U0 490 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 IL31RAQ8NI17 732 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 FAM136AQ96C01 138 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 FBXL18Q96ME1 805 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 HNRNPABQ99729 332 aaKnown RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 PNPLA8Q9NP80 782 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 DNAAF2Q9NVR5 837 aaKnown RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 USE1Q9NZ43 259 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 H7C0S8 307 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 MGRN1O60291 552 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 OTCP00480 354 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 UGT2B4P06133 528 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 JMJD7P0C870 316 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 PNMA6AP0CW24 399 aaPredicted RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 ERCC2P18074 760 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 MAGEA10P43363 369 aaPredicted RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 KLK7P49862 253 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 NDST2P52849 883 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 NRLP54845 237 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 CNGA3Q16281 694 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 RFTN2Q52LD8 501 aaPredicted RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 PDSS1Q5T2R2 415 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 CNSTQ6PJW8 725 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 LRRC69Q6ZNQ3 347 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 RNF168Q8IYW5 571 aaPredicted RBP4.27□□□□□ -1.73
VCAN-209ENST00000513016 AHI1Q8N157 1196 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 OR52L1Q8NGH7 329 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 POF1BQ8WVV4 589 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 CD101Q93033 1021 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 SNX27Q96L92 541 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 MFSD14AQ96MC6 490 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 PDZD7Q9H5P4 517 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 CDHR5Q9HBB8 845 aa4.27□□□□□ -1.73
VCAN-209ENST00000513016 HPS4Q9NQG7 708 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms