RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 NEPROQ6NW34 567 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 AFTPHQ6ULP2 937 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 ANKRA2Q9H9E1 313 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 MEMO1Q9Y316 297 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 SAMHD1Q9Y3Z3 626 aaKnown RBP8.43□□□□□ -1.06
HTT-208ENST00000510626 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 A0A0G2JPF8 293 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 HNRNPCL3B7ZW38 293 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 TPD52L2O43399 206 aaKnown RBP8.43□□□□□ -1.06
HTT-208ENST00000510626 HNRNPCL4P0DMR1 293 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 PITPNAQ00169 270 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 CDC16Q13042 620 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 VWA5B1Q5TIE3 1220 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 ZNF470Q6ECI4 717 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.43□□□□□ -1.06
HTT-208ENST00000510626 FRMD7Q6ZUT3 714 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 CBWD2Q8IUF1 395 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 TEX47Q8TBZ9 253 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 CCDC107Q8WV48 283 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 RAVER2Q9HCJ3 691 aaKnown RBP8.43□□□□□ -1.06
HTT-208ENST00000510626 CCDC167Q9P0B6 97 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 C5orf60A6NFR6 353 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 TPP1O14773 563 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 SLC22A3O75751 556 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 MZF1P28698 734 aaPredicted RBP8.43□□□□□ -1.06
HTT-208ENST00000510626 AXLP30530 894 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 S100A12P80511 92 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 PTSQ03393 145 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 BMT2Q1RMZ1 405 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 STXBP5Q5T5C0 1151 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 LENG9Q96B70 501 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 SERAC1Q96JX3 654 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 UNC93B1Q9H1C4 597 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 SEMA6AQ9H2E6 1030 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 SCELO95171 688 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 AVPR1AP37288 418 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 TCEA2Q15560 299 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 KLHL24Q6TFL4 600 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 IL27RAQ6UWB1 636 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 MPZL3Q6UWV2 235 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 SLC47A2Q86VL8 602 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 OFCC1Q8IZS5 231 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 CISHQ9NSE2 258 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 DPPA5A6NC42 116 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 CFL1P23528 166 aaKnown RBP8.43□□□□□ -1.06
HTT-208ENST00000510626 RGS7P49802 495 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 C10orf62Q5T681 223 aaPredicted RBP8.43□□□□□ -1.06
HTT-208ENST00000510626 ADCK2Q7Z695 626 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 SLC44A5Q8NCS7 719 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 LRRC20Q8TCA0 184 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 EML1O00423 815 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 BCKDKO14874 412 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 KPNA6O60684 536 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 MOCS2O96007 188 aaPredicted RBP8.43□□□□□ -1.06
HTT-208ENST00000510626 IFNGP01579 166 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 USP49Q70CQ1 688 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 CRYL1Q9Y2S2 319 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 TELO2Q9Y4R8 837 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 PCDHGB1Q9Y5G3 927 aa8.43□□□□□ -1.06
HTT-208ENST00000510626 ALKQ9UM73 1620 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 YES1P07947 543 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 NTSP30990 170 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 FOXD4Q12950 439 aaPredicted RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 TDGQ13569 410 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 ZC3H12AQ5D1E8 599 aaKnown RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 ZZZ3Q8IYH5 903 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 CIDECQ96AQ7 238 aaPredicted RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 PCDHGB3Q9Y5G1 929 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 CABIN1Q9Y6J0 2220 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 NOL4O94818 638 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 NRF1Q16656 503 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 MILR1Q7Z6M3 343 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 METTL6Q8TCB7 284 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 TLCD1Q96CP7 247 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 SMARCD1Q96GM5 515 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 SP140LQ9H930 580 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 NUP214P35658 2090 aaPredicted RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 A0A087WZ62 844 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 A0A1W2PQ72 361 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 PGK1P00558 417 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 CST1P01037 141 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 PLEKHO2Q8TD55 490 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 DDX17Q92841 729 aaKnown RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 TADA2AO75478 443 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 TFRCP02786 760 aaKnown RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 TBC1D16Q8TBP0 767 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 AURKBQ96GD4 344 aaPredicted RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 CNOT11Q9UKZ1 510 aaKnown RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 B3GNT3Q9Y2A9 372 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 ATP6V1G1O75348 118 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 NDUFB10O96000 172 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 NTRK3Q16288 839 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 ALG11Q2TAA5 492 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 UNC93AQ86WB7 457 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 SLCO2A1Q92959 643 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 TMEM138Q9NPI0 162 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 PIN4Q9Y237 131 aaKnown RBP8.42□□□□□ -1.06
HTT-208ENST00000510626 ADGRB2O60241 1585 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 CPS1P31327 1500 aa8.42□□□□□ -1.06
HTT-208ENST00000510626 SULT1B1O43704 296 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms