RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 LUC7L3O95232 432 aaKnown RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 HDCP19113 662 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 NCBP1Q09161 790 aaKnown RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 MAP4K2Q12851 820 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 SGO1Q5FBB7 561 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 RNFT1Q5M7Z0 435 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 ARL6IP4Q66PJ3 421 aaKnown RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 C19orf35Q6ZS72 473 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 USP51Q70EK9 711 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 CBARPQ8N350 705 aaPredicted RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 NSUN7Q8NE18 718 aaKnown RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 ZFAND2BQ8WV99 257 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 GAB3Q8WWW8 586 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 CELF1Q92879 486 aaKnown RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 ZBTB18Q99592 522 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 JPH2Q9BR39 696 aaPredicted RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 TRMT61BQ9BVS5 477 aaKnown RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 PBX4Q9BYU1 374 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 GOLPH3LQ9H4A5 285 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 TMEM231Q9H6L2 316 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 C8orf33Q9H7E9 229 aaPredicted RBP3.96□□□□□ -1.77
NEDD4-209ENST00000508871 MID1IP1Q9NPA3 183 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 SCUBE2Q9NQ36 999 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 RHBDL2Q9NX52 303 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 NAGPAQ9UK23 515 aa3.96□□□□□ -1.77
NEDD4-209ENST00000508871 HEATR9A2RTY3 570 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 HSBP1L1C9JCN9 74 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 BOLA2-SMG1P6H3BVE0 249 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 CYR61O00622 381 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 NDUFAB1O14561 156 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 AVILO75366 819 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ASS1P00966 412 aaKnown RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SLC2A5P22732 501 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 HOXA7P31268 230 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 MAGEA8P43361 318 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 WNT7BP56706 349 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 KCNC3Q14003 757 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 IL18Q14116 193 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 BOP1Q14137 746 aaKnown RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 INPP5AQ14642 412 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 RAB30Q15771 203 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FAM110CQ1W6H9 321 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ADALQ6DHV7 355 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SLC22A9Q8IVM8 553 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 CACNA2D3Q8IZS8 1091 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FAM185AQ8N0U4 392 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 OR52K1Q8NGK4 314 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 OR8K3Q8NH51 312 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ESR2Q92731 530 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 KTI12Q96EK9 354 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SCLYQ96I15 445 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 CDK5RAP1Q96SZ6 601 aaKnown RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ELF4Q99607 663 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 RAD21L1Q9H4I0 556 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 LY9Q9HBG7 655 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 DYRK4Q9NR20 520 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 KLHL1Q9NR64 748 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FAM96BQ9Y3D0 163 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 NEDD4P46934 1319 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 MAPK13O15264 365 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SPOPO43791 374 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PDE5AO76074 875 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 TYMPP19971 482 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 IDUAP35475 653 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 RGS19P49795 217 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PPP2R2BQ00005 443 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 RESTQ13127 1097 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ITGA7Q13683 1181 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 CYLC2Q14093 348 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ARHGEF7Q14155 803 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 GAS6Q14393 721 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FSCN1Q16658 493 aaKnown RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 CA9Q16790 459 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 AP5B1Q2VPB7 878 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 WDR72Q3MJ13 1102 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FAM76BQ5HYJ3 339 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 LIN54Q6MZP7 749 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ULK2Q8IYT8 1036 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 DNAJC5GQ8N7S2 189 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ADAMTS15Q8TE58 950 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FBXL20Q96IG2 436 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 HIST1H2AAQ96QV6 131 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 TRIM2Q9C040 744 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ZMYND8Q9ULU4 1186 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 LOC100509620A0A075B734 347 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 LOC102723971A0A1B0GUV8 181 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FOXO6A8MYZ6 492 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 E9PMD0 336 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 H7C4K7 107 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 MASP2O00187 686 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 BTN3A1O00481 513 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 AHSGP02765 367 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ALPPP05187 535 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ALPPL2P10696 532 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SLC2A4P14672 509 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SYT1P21579 422 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PTX3P26022 381 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 MGAT1P26572 445 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PTGIRP43119 386 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms