RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 TLX3O43711 291 aaPredicted RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 TLR2O60603 784 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 HNRNPCL1O60812 293 aaKnown RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 PAGE4O60829 102 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CNOT3O75175 753 aaKnown RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 IPO7O95373 1038 aaKnown RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 MLYCDO95822 493 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 MT-CYBP00156 380 aaPredicted RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 TFP02787 698 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CTPS1P17812 591 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CDAP32320 146 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 ICAM3P32942 547 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 RYKP34925 604 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 ZNF91Q05481 1191 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 NIPAL4Q0D2K0 466 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CSTF3Q12996 717 aaKnown RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CHAF1BQ13112 559 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 OLIG2Q13516 323 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 ACVR2BQ13705 512 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 PKP1Q13835 747 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 RUNX2Q13950 521 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 WTAPQ15007 396 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CEP78Q5JTW2 689 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 PIK3CD-AS1Q5SR53 167 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CYP20A1Q6UW02 462 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 TRIM74Q86UV6 250 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 TRIM73Q86UV7 250 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 ANKRD13BQ86YJ7 626 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 TICAM1Q8IUC6 712 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 ARHGAP12Q8IWW6 846 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 KIAA2013Q8IYS2 634 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CADM3Q8N126 398 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 TTC39CQ8N584 583 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 TMEM116Q8NCL8 245 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 C1orf131Q8NDD1 294 aaKnown RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 MCPH1Q8NEM0 835 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 RASSF8Q8NHQ8 419 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 BICD2Q8TD16 824 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 SGCDQ92629 289 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 DPF1Q92782 380 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 ATOH1Q92858 354 aaPredicted RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 GTF3C6Q969F1 213 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CCDC34Q96HJ3 373 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 NCAPGQ9BPX3 1015 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 PRSS22Q9GZN4 317 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CDT1Q9H211 546 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 SMARCAD1Q9H4L7 1026 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 SH2D4AQ9H788 454 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 KAT14Q9H8E8 782 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 FBRSL1Q9HCM7 1045 aaKnown RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 WDR6Q9NNW5 1121 aaKnown RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 PDGFCQ9NRA1 345 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 THSD1Q9NS62 852 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 DLGAP2Q9P1A6 1054 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 POLG2Q9UHN1 485 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CORO1CQ9ULV4 474 aaPredicted RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 MTMR6Q9Y217 621 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 CAPN7Q9Y6W3 813 aa3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 COL11A2P13942 1736 aaPredicted RBP3.94□□□□□ -1.78
COL4A3BP-205ENST00000508692 WIPF3A6NGB9 483 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 HSPB6O14558 160 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 SCAMP1O15126 338 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 SLC25A17O43808 307 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 SEC31AO94979 1220 aaKnown RBP3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 KLKB1P03952 638 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 EPHB2P29323 1055 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 MPGP29372 298 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 TM4SF1P30408 202 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 MAPK4P31152 587 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 TTKP33981 857 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 MC1RQ01726 317 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 CREB5Q02930 508 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 EPS8Q12929 822 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 FRG1Q14331 258 aaKnown RBP3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 MED22Q15528 200 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 TRIP6Q15654 476 aaKnown RBP3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 SMTNL2Q2TAL5 461 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 DUSP28Q4G0W2 176 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 PLEKHS1Q5SXH7 462 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 HEPHL1Q6MZM0 1159 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 SLC18B1Q6NT16 456 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 TTI2Q6NXR4 508 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 KLHL35Q6PF15 583 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 CNGA4Q8IV77 575 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 ADGRF2Q8IZF7 708 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 PRSS3P2Q8NHM4 247 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 MPLKIPQ8TAP9 179 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 PSPC1Q8WXF1 523 aaKnown RBP3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 FAM120BQ96EK7 910 aaKnown RBP3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 FEM1CQ96JP0 617 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 CMTM3Q96MX0 182 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 BBS4Q96RK4 519 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 SIN3AQ96ST3 1273 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 B3GNT4Q9C0J1 378 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 PLEKHA4Q9H4M7 779 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 AAMDCQ9H7C9 122 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 SMYD2Q9NRG4 433 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 ANKRD10Q9NXR5 420 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 CLIC5Q9NZA1 410 aa3.93□□□□□ -1.78
COL4A3BP-205ENST00000508692 TBC1D29Q9UFV1 150 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms