RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 C9orf64Q5T6V5 341 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 CHRDL2Q6WN34 429 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 RBM43Q6ZSC3 357 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 GRASPQ7Z6J2 395 aaPredicted RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 SPATA4Q8NEY3 305 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 APBB2Q92870 758 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 BADQ92934 168 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 FAM198AQ9UFP1 575 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 BTRCQ9Y297 605 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 MRPS7Q9Y2R9 242 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 RGS14O43566 566 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 RBP1P09455 135 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 PSMB4P28070 264 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 ANTXR2P58335 489 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 FAM183BPQ6ZVS7 135 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 OR56A4Q8NGH8 313 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 HTR3CQ8WXA8 447 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 MR1Q95460 341 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 MRPL45Q9BRJ2 306 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 AARSD1Q9BTE6 412 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 BLOC1S6Q9UL45 172 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 A0A075B6Q4 140 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 ZNF208O43345 1280 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 GLRA3O75311 464 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 ME2P23368 584 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 DNASE1L1P49184 302 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 SNRPFP62306 86 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 RPL6Q02878 288 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 CDH17Q12864 832 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 DUPD1Q68J44 220 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 NPAS4Q8IUM7 802 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 QRFPRQ96P65 431 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 GAL3ST1Q99999 423 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 RBM12Q9NTZ6 932 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 GGA2Q9UJY4 613 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 CLEC4AQ9UMR7 237 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 PHF24Q9UPV7 400 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 CFAP20Q9Y6A4 193 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 NEXMIFQ5QGS0 1516 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 SHROOM2Q13796 1616 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 CARNS1A5YM72 827 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 ATP5F1P24539 256 aaPredicted RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 TKTP29401 623 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 CYP4F3Q08477 520 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 TTC33Q6PID6 262 aaPredicted RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 APTXQ7Z2E3 356 aaKnown RBP9.05□□□□□ -0.96
KLHL3-209ENST00000508657 ANKRD23Q86SG2 305 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 MPP5Q8N3R9 675 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 TMEM132CQ8N3T6 1108 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 OXR1Q8N573 874 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 CPQQ9Y646 472 aa9.05□□□□□ -0.96
KLHL3-209ENST00000508657 TRIM64BA6NI03 449 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 USP2O75604 605 aaPredicted RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 CCNB2O95067 398 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 KLHL2O95198 593 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 MC4RP32245 332 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 RCAN1P53805 252 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 ISLR2Q6UXK2 745 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 SLC24A5Q71RS6 500 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 PEG10Q86TG7 708 aaKnown RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 TMEM151BQ8IW70 566 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 TMEM156Q8N614 296 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 RNF148Q8N7C7 305 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 NUSAP1Q9BXS6 441 aaKnown RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 UNC93B1Q9H1C4 597 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 DMGDHQ9UI17 866 aaKnown RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 TMEM120BA0PK00 339 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 BCLAF3A2AJT9 711 aaKnown RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 C9IYK1 514 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 SGTAO43765 313 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 GJA9P57773 515 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 GRIK5Q16478 980 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 CPSF6Q16630 551 aaKnown RBP eCLIP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 HYIQ5T013 277 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 ZNF720Q7Z2F6 126 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 KRT73Q86Y46 540 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 MDM1Q8TC05 714 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 DNAJA3Q96EY1 480 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 CYP2S1Q96SQ9 504 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 ADAM28Q9UKQ2 775 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 ZNF214Q9UL59 606 aaPredicted RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 PSTPIP1O43586 416 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 MT-CYBP00156 380 aaPredicted RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 CCKBRP32239 447 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 MAGEA10P43363 369 aaPredicted RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 CLCNKBP51801 687 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 FKBP1BP68106 108 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 C6orf132Q5T0Z8 1188 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 FOXR2Q6PJQ5 311 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 OTOP3Q7RTS5 596 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 OR4A15Q8NGL6 344 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 PNPT1Q8TCS8 783 aaKnown RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 UPF1Q92900 1129 aaKnown RBP eCLIP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 MYO19Q96H55 970 aa9.04□□□□□ -0.96
KLHL3-209ENST00000508657 NOP53Q9NZM5 478 aaKnown RBP9.04□□□□□ -0.96
KLHL3-209ENST00000508657 ZFP37Q9Y6Q3 630 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms