RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 CUL1Q13616 776 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 SPARCL1Q14515 664 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 TPSAB1Q15661 275 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 SLC14A2Q15849 920 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 ERCC6LQ2NKX8 1250 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 C9orf64Q5T6V5 341 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 ARMC12Q5T9G4 340 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 ALG1LQ6GMV1 187 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 PRPF39Q86UA1 669 aaKnown RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 HOOK3Q86VS8 718 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 CAMK1DQ8IU85 385 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 PGBD3Q8N328 593 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 SLC25A41Q8N5S1 370 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 ARRDC2Q8TBH0 407 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 CPT1BQ92523 772 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 EZH1Q92800 747 aaPredicted RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 EDAQ92838 391 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 PTPRN2Q92932 1015 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 MYO19Q96H55 970 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 OXNAD1Q96HP4 312 aaPredicted RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 ZNF419Q96HQ0 510 aaPredicted RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 PPP1R16AQ96I34 528 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 ZNF641Q96N77 438 aaPredicted RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 APOL2Q9BQE5 337 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 CPEB1Q9BZB8 566 aaKnown RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 FBRSQ9HAH7 460 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 POLMQ9NP87 494 aaPredicted RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 PRSS16Q9NQE7 514 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 EIF2B3Q9NR50 452 aaKnown RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 MMP17Q9ULZ9 603 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 SHOC2Q9UQ13 582 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 CHKBQ9Y259 395 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 SIT1Q9Y3P8 196 aa11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 ARIH1Q9Y4X5 557 aaPredicted RBP11.14□□□□□ -0.63
BRCC3P1-201ENST00000508559 A0A1W2PQ67 120 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 SOCS5O75159 536 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 ZNF821O75541 412 aaPredicted RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 LEFTY1O75610 366 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 ALDH1A2O94788 518 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 CPP00450 1065 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 AGTP01019 485 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 CHRNB1P11230 501 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 ACADMP11310 421 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 CR2P20023 1033 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 DRG2P55039 364 aaKnown RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 ARL4CP56559 192 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 POLR2LP62875 67 aaKnown RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 POM121L1PQ3SYA9 428 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 DNAJC21Q5F1R6 531 aaKnown RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 RNASEH2BQ5TBB1 312 aaKnown RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 ZNF776Q68DI1 518 aaPredicted RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 CEP128Q6ZU80 1094 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 CCDC25Q86WR0 208 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 CACUL1Q86Y37 369 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 MMAAQ8IVH4 418 aaKnown RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 PDIK1LQ8N165 341 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 GPR161Q8N6U8 529 aaKnown RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 LPCAT1Q8NF37 534 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 PJA1Q8NG27 643 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 OR2T3Q8NH03 318 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 PIP4K2CQ8TBX8 421 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 RUBCNQ92622 972 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 FEM1CQ96JP0 617 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 KLHL32Q96NJ5 620 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 GABRG3Q99928 467 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 MLPHQ9BV36 600 aaPredicted RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 FRMD8Q9BZ67 464 aaPredicted RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 OSBPL6Q9BZF3 934 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 FAM129AQ9BZQ8 928 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 SUV39H2Q9H5I1 410 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 XAB2Q9HCS7 855 aaKnown RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 BCCIPQ9P287 314 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 HCN2Q9UL51 889 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 MTF2Q9Y483 593 aaPredicted RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 PCDHB9Q9Y5E1 797 aa11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
BRCC3P1-201ENST00000508559 COL4A2P08572 1712 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 TCRBV21S2A2A0A5A6 115 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 ANTXRLA6NF34 631 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 USP12O75317 370 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 NDST3O95803 873 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 ADH1BP00325 375 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 DNTTP04053 509 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 TUBBP07437 444 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 MMP2P08253 660 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 HLA-DPA1P20036 260 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 IVDP26440 423 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 DGKEP52429 567 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 SESN2P58004 480 aaPredicted RBP11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 CDH17Q12864 832 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 TRAF2Q12933 501 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 CAMK2GQ13555 558 aaPredicted RBP11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 GALNT3Q14435 633 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 KCNJ11Q14654 390 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 TTC31Q49AM3 519 aaPredicted RBP11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 ZNF805Q5CZA5 627 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 ANKRD22Q5VYY1 191 aa11.12□□□□□ -0.63
BRCC3P1-201ENST00000508559 HIBCHQ6NVY1 386 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms