RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 ITGB6P18564 788 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 HDCP19113 662 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 HADHAP40939 763 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 PSME3P61289 254 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 SFT2D3Q587I9 215 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 ZC3HC1Q86WB0 502 aaKnown RBP12.99□□□□□ -0.33
SMG7-214ENST00000508461 KBTBD2Q8IY47 623 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 ARHGAP18Q8N392 663 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 ZNF276Q8N554 614 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 PCYOX1LQ8NBM8 494 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 ZC3H15Q8WU90 426 aaKnown RBP12.99□□□□□ -0.33
SMG7-214ENST00000508461 SYT17Q9BSW7 474 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 PCDHAC1Q9H158 963 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 VTI1BQ9UEU0 232 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 EGFL7Q9UHF1 273 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 RNF112Q9ULX5 631 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 FAF1Q9UNN5 650 aaPredicted RBP12.99□□□□□ -0.33
SMG7-214ENST00000508461 CBX4O00257 560 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 DCLK1O15075 740 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 PFDN6O15212 129 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 DLX3O60479 287 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 HLA-DQB2P05538 268 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 TSTA3Q13630 321 aaPredicted RBP12.99□□□□□ -0.33
SMG7-214ENST00000508461 MRNIPQ6NTE8 343 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 PTGR2Q8N8N7 351 aaPredicted RBP12.99□□□□□ -0.33
SMG7-214ENST00000508461 ATP6V0D2Q8N8Y2 350 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 CASP10Q92851 521 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 SERPINB11Q96P15 392 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 RTKNQ9BST9 563 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 CD274Q9NZQ7 290 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 HACD3Q9P035 362 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 GNGT2O14610 69 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 LTA4HP09960 611 aaKnown RBP12.99□□□□□ -0.33
SMG7-214ENST00000508461 PSMC3P17980 439 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 LRPAP1P30533 357 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 FMO4P31512 558 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 TMED1Q13445 227 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 CES4AQ5XG92 561 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 FAM117BQ6P1L5 589 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 ZYG11AQ6WRX3 759 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMG7-214ENST00000508461 RP9Q8TA86 221 aaKnown RBP12.99□□□□□ -0.33
SMG7-214ENST00000508461 TRPC4APQ8TEL6 797 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 CENPIQ92674 756 aaPredicted RBP12.99□□□□□ -0.33
SMG7-214ENST00000508461 SLC39A3Q9BRY0 314 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 MUC3BQ9H195 1237 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 OXSMQ9NWU1 459 aa12.99□□□□□ -0.33
SMG7-214ENST00000508461 E9PAM4 449 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 KCNE1P15382 129 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
SMG7-214ENST00000508461 PTPRCAPQ14761 206 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 INTS6LQ5JSJ4 861 aaKnown RBP12.98□□□□□ -0.33
SMG7-214ENST00000508461 C6orf52Q5T4I8 152 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 PIWIL4Q7Z3Z4 852 aaKnown RBP12.98□□□□□ -0.33
SMG7-214ENST00000508461 CUZD1Q86UP6 607 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 TBATAQ96M53 351 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 SMPD4Q9NXE4 827 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 PFDN1O60925 122 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 S100BP04271 92 aaPredicted RBP12.98□□□□□ -0.33
SMG7-214ENST00000508461 UQCRBP14927 111 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 GRIA3P42263 894 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 ZBTB49Q6ZSB9 765 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 LZTR1Q8N653 840 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 CATSPER1Q8NEC5 780 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 CCDC97Q96F63 343 aaPredicted RBP12.98□□□□□ -0.33
SMG7-214ENST00000508461 DCUN1D1Q96GG9 259 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 MRPL57Q9BQC6 102 aaKnown RBP12.98□□□□□ -0.33
SMG7-214ENST00000508461 MARCH2Q9P0N8 246 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 AP4B1Q9Y6B7 739 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 COL11A1P12107 1806 aaPredicted RBP12.98□□□□□ -0.33
SMG7-214ENST00000508461 C15orf38-AP3S2A0A0A6YYH1 394 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 LIN7AO14910 233 aaPredicted RBP12.98□□□□□ -0.33
SMG7-214ENST00000508461 SLC2A3P11169 496 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 ESRRGP62508 458 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 DPYSQ14117 519 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 PCBP1Q15365 356 aaKnown RBP eCLIP12.98□□□□□ -0.332e-7■■■■■ 28
SMG7-214ENST00000508461 TMCO4Q5TGY1 634 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 AAGABQ6PD74 315 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 ARPINQ7Z6K5 226 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 C3orf58Q8NDZ4 430 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 PSMG2Q969U7 264 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 ESAMQ96AP7 390 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 HIC2Q96JB3 615 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 TMEM79Q9BSE2 394 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 APOL5Q9BWW9 433 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 TLE6Q9H808 572 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 ZFYVE28Q9HCC9 887 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 CASS4Q9NQ75 786 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 CROTQ9UKG9 612 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 GJD2Q9UKL4 321 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 TCAF1Q9Y4C2 921 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
SMG7-214ENST00000508461 CAPN14A8MX76 684 aa12.97□□□□□ -0.33
SMG7-214ENST00000508461 F8W810 466 aa12.97□□□□□ -0.33
SMG7-214ENST00000508461 ZNF189O75820 626 aaPredicted RBP12.97□□□□□ -0.33
SMG7-214ENST00000508461 IL10P22301 178 aa12.97□□□□□ -0.33
SMG7-214ENST00000508461 GPR15P49685 360 aa12.97□□□□□ -0.33
SMG7-214ENST00000508461 GRB14Q14449 540 aa12.97□□□□□ -0.33
SMG7-214ENST00000508461 POTEHQ6S545 545 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms