RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 PCDHB11Q9Y5F2 797 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 FADS3Q9Y5Q0 445 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 HS3ST3A1Q9Y663 406 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 CSNK1G3Q9Y6M4 447 aa5.86□□□□□ -1.47
GYPB-208ENST00000507009 ZFC3H1O60293 1989 aaKnown RBP5.86□□□□□ -1.47
GYPB-208ENST00000507009 PRAMEF33A0A0G2JMD5 474 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 C16orf96A6NNT2 1141 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 D6RAR5 112 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 TPP1O14773 563 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 PSMA7O14818 248 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 SUV39H1O43463 412 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 NOBOXO60393 691 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 PRAMEF10O60809 474 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 MMP20O60882 483 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 HSF2BPO75031 334 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 PPFIA2O75334 1257 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 DAB1O75553 588 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 ERBB2P04626 1255 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 UGT2B4P06133 528 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 LIPCP11150 499 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 WT1P19544 449 aaPredicted RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 ITIH2P19823 946 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 ITGB7P26010 798 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 EIF4A3P38919 411 aaKnown RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 ETV5P41161 510 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 PPM1FP49593 454 aaPredicted RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 SERPINH1P50454 418 aaKnown RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 STX17P56962 302 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 PFN3P60673 137 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 PPARDQ03181 441 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 LRRC63Q05C16 580 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 DEUP1Q05D60 604 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 STIM1Q13586 685 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 PTK2BQ14289 1009 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 CLCA4Q14CN2 919 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 AGERQ15109 404 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 IGFBP7Q16270 282 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 SKIDA1Q1XH10 827 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 CARD16Q5EG05 197 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 EFHC1Q5JVL4 640 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 ATXN7L2Q5T6C5 722 aaPredicted RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 RETSATQ6NUM9 610 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 ENPP7Q6UWV6 458 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 C11orf57Q6ZUT1 292 aaPredicted RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 BEND5Q7L4P6 421 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 TMEM110Q86TL2 294 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 DCAF4L2Q8NA75 395 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 NETO2Q8NC67 525 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 C1orf131Q8NDD1 294 aaKnown RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 PCDH19Q8TAB3 1148 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 LMO3Q8TAP4 145 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 CXorf40AQ8TE69 158 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 STK32AQ8WU08 396 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 SCG3Q8WXD2 468 aaKnown RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 USP7Q93009 1102 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 SMARCE1Q969G3 411 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 GRAMD1AQ96CP6 724 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 LIN37Q96GY3 246 aaPredicted RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 KLHL32Q96NJ5 620 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 SLC2A13Q96QE2 648 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 KLF6Q99612 283 aaPredicted RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 CRACR2AQ9BSW2 395 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 BOCQ9BWV1 1114 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 CLPBQ9H078 707 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 ANLNQ9NQW6 1124 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 MBNL1Q9NR56 388 aaKnown RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 STARD5Q9NSY2 213 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 FOXJ2Q9P0K8 574 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 ANKMY1Q9P2S6 941 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 HECAQ9UBI9 543 aaPredicted RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 PNMA8BQ9ULN7 279 aaPredicted RBP5.85□□□□□ -1.47
GYPB-208ENST00000507009 GPR34Q9UPC5 381 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 CTNND2Q9UQB3 1225 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 TBC1D30Q9Y2I9 924 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 COQ6Q9Y2Z9 468 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 CHD5Q8TDI0 1954 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 BOD1L1Q8NFC6 3051 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 COL12A1Q99715 3063 aa5.85□□□□□ -1.47
GYPB-208ENST00000507009 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.47
GYPB-208ENST00000507009 A0A1W2PQM1 296 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 B4DGG1 531 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 LMO7DNF2Z398 122 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 GOLGA8SH3BPF8 625 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 TSPAN6O43657 245 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 LZTS3O60299 673 aaPredicted RBP5.84□□□□□ -1.47
GYPB-208ENST00000507009 TM7SF2O76062 418 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 SMC2O95347 1197 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 AFPP02771 609 aaKnown RBP5.84□□□□□ -1.47
GYPB-208ENST00000507009 PCCBP05166 539 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 SFTPCP11686 197 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 ITGB6P18564 788 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 XPAP23025 273 aaPredicted RBP5.84□□□□□ -1.47
GYPB-208ENST00000507009 KRT9P35527 623 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 ACVRL1P37023 503 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 RPL34P49207 117 aaKnown RBP5.84□□□□□ -1.47
GYPB-208ENST00000507009 APBA1Q02410 837 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 GCNT1Q02742 428 aa5.84□□□□□ -1.47
GYPB-208ENST00000507009 EIF4EBP2Q13542 120 aaPredicted RBP5.84□□□□□ -1.47
GYPB-208ENST00000507009 UBAP2LQ14157 1087 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms