RNA–Protein interactions for RNA: ENST00000506832.6

GPATCH4-211, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-211ENST00000506832 KLF6Q99612 283 aaPredicted RBP12.98□□□□□ -0.33
GPATCH4-211ENST00000506832 SYT11Q9BT88 431 aa12.98□□□□□ -0.33
GPATCH4-211ENST00000506832 CINPQ9BW66 212 aaPredicted RBP12.98□□□□□ -0.33
GPATCH4-211ENST00000506832 SUDS3Q9H7L9 328 aaPredicted RBP12.98□□□□□ -0.33
GPATCH4-211ENST00000506832 APOBEC3BQ9UH17 382 aaKnown RBP12.98□□□□□ -0.33
GPATCH4-211ENST00000506832 KLF15Q9UIH9 416 aa12.98□□□□□ -0.33
GPATCH4-211ENST00000506832 GPSM3Q9Y4H4 160 aa12.98□□□□□ -0.33
GPATCH4-211ENST00000506832 PCDHB1Q9Y5F3 818 aa12.98□□□□□ -0.33
GPATCH4-211ENST00000506832 CEP295Q9C0D2 2601 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 TTC24A2A3L6 582 aaPredicted RBP12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 ARHGAP42A6NI28 874 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 A8MX80 341 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 K7ESM1 405 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 TM7SF2O76062 418 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 RNF8O76064 485 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 TCF4P15884 667 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 TIMP2P16035 220 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 ERCC2P18074 760 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 MIPP30301 263 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 SSR1P43307 286 aaKnown RBP12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 YBEYP58557 167 aaPredicted RBP12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 HNRNPKP61978 463 aaKnown RBP eCLIP12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 EIF2B5Q13144 721 aaKnown RBP12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 ZNF211Q13398 564 aaPredicted RBP12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 PRRT3Q5FWE3 981 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 ERMARDQ5T6L9 678 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 FAXCQ5TGI0 409 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 PLEKHA7Q6IQ23 1121 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 RFX8Q6ZV50 586 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 NYAP1Q6ZVC0 841 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 CAMK1DQ8IU85 385 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 ARFGAP1Q8N6T3 406 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 RAB7BQ96AH8 199 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 VOPP1Q96AW1 172 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 ARHGEF26Q96DR7 871 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 NAF1Q96HR8 494 aaKnown RBP12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 BPIFA3Q9BQP9 254 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 C1QTNF2Q9BXJ5 285 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 CBX8Q9HC52 389 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 SIRPGQ9P1W8 387 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 CLCA2Q9UQC9 943 aa12.97□□□□□ -0.33
GPATCH4-211ENST00000506832 CHD5Q8TDI0 1954 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 SPTY2D1-AS1A0A0U1RR47 76 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 A0A1B0GTH6 734 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 AGRPO00253 132 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 AREL1O15033 823 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 MUSKO15146 869 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 AQP9O43315 295 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 LRCH4O75427 683 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 PALMO75781 387 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 MT-CO3P00414 261 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 CELA2BP08218 269 aaPredicted RBP12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 GIMD1P0DJR0 217 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 C6P13671 934 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 NME1P15531 152 aaKnown RBP12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 ACP1P24666 158 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 TPM4P67936 248 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 NFKBIBQ15653 356 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 GUSBP11Q6P575 273 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 PDZD3Q86UT5 571 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 ZSWIM9Q86XI8 627 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 PHACTR4Q8IZ21 702 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 UMODL1-AS1Q8N2C9 162 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 IFI44Q8TCB0 444 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 ABCG4Q9H172 646 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 LRRC19Q9H756 370 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 PDFQ9HBH1 243 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 PCDH12Q9NPG4 1184 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 WDR70Q9NW82 654 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 NLGN3Q9NZ94 848 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 PNMA8BQ9ULN7 279 aaPredicted RBP12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 HS3ST3A1Q9Y663 406 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 SCINQ9Y6U3 715 aa12.96□□□□□ -0.33
GPATCH4-211ENST00000506832 GOLGA4Q13439 2230 aaKnown RBP12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 NEMP2A6NFY4 417 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 TMEM191CA6NGB0 347 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 WASH4PA8MWX3 477 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 CASC3O15234 703 aaKnown RBP12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 TLX3O43711 291 aaPredicted RBP12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 LZTS3O60299 673 aaPredicted RBP12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 BRINP1O60477 761 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 BUB1BO60566 1050 aaPredicted RBP12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 PRAMEF11O60813 436 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 CSF2P04141 144 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 MPOP05164 745 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 C1SP09871 688 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 ITPKBP27987 946 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 AIF1P55008 147 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 ADKP55263 362 aaKnown RBP12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 PFN3P60673 137 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 FANCCQ00597 558 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 IQCB1Q15051 598 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 INO80DQ53TQ3 878 aaPredicted RBP12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 DENND2CQ68D51 928 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 ERAP2Q6P179 960 aa12.95□□□□□ -0.34
GPATCH4-211ENST00000506832 FOXR1Q6PIV2 292 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms