RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ALDH1A3P47895 512 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 CYLC2Q14093 348 aaPredicted RBP17.12■□□□□ 0.33
LIN54-204ENST00000505397 PRPSAP1Q14558 356 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 USP10Q14694 798 aaKnown RBP17.12■□□□□ 0.33
LIN54-204ENST00000505397 MMEL1Q495T6 779 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PIP4K2CQ8TBX8 421 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PKMYT1Q99640 499 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 CENPKQ9BS16 269 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 TKTL2Q9H0I9 626 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 WDCPQ9H6R7 721 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 UBP1Q9NZI7 540 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 RUVBL2Q9Y230 463 aaKnown RBP17.12■□□□□ 0.33
LIN54-204ENST00000505397 DENRO43583 198 aaKnown RBP17.12■□□□□ 0.33
LIN54-204ENST00000505397 PABPC4LP0CB38 370 aaKnown RBP17.12■□□□□ 0.33
LIN54-204ENST00000505397 GRIA2P42262 883 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 NAGLUP54802 743 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PDK3Q15120 406 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PCID2Q5JVF3 399 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PKN3Q6P5Z2 889 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 CTU1Q7Z7A3 348 aaKnown RBP17.12■□□□□ 0.33
LIN54-204ENST00000505397 LRRTM3Q86VH5 581 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PGAM4Q8N0Y7 254 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PDCD6IPQ8WUM4 868 aaKnown RBP17.12■□□□□ 0.33
LIN54-204ENST00000505397 KCTD4Q8WVF5 259 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 IRGQQ8WZA9 623 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 NUF2Q9BZD4 464 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 ACSS2Q9NR19 701 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 NEU3Q9UQ49 428 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PATJQ8NI35 1801 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 NEMP1O14524 444 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 DLX3O60479 287 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 GSTT1P30711 240 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 PGGT1BP53609 377 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 FOLH1Q04609 750 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 OTOP3Q7RTS5 596 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 ICA1LQ8NDH6 482 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 TRIM4Q9C037 500 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 ZBTB26Q9HCK0 441 aa17.12■□□□□ 0.33
LIN54-204ENST00000505397 TET1Q8NFU7 2136 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 SHROOM3Q8TF72 1996 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 TANC1Q9C0D5 1861 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 ENPP3O14638 875 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 CAPNS1P04632 268 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 ARCN1P48444 511 aaKnown RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 THOP1P52888 689 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 TSTD2Q5T7W7 516 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 BNC2Q6ZN30 1099 aaPredicted RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 TICAM1Q8IUC6 712 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 CCDC117Q8IWD4 279 aaPredicted RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 MFSD6LQ8IWD5 586 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 MARVELD2Q8N4S9 558 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 MAELQ96JY0 434 aaKnown RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 TSNARE1Q96NA8 513 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 CDRT15Q96T59 188 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 TRIM62Q9BVG3 475 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 CDYLQ9Y232 598 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 AAR2Q9Y312 384 aaKnown RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 DTNAQ9Y4J8 743 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 SLC4A7Q9Y6M7 1214 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 SNUPNO95149 360 aaKnown RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 JUNP05412 331 aaKnown RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 GRIK1P39086 918 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 GLRBP48167 497 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 CHN2P52757 468 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 UGP2Q16851 508 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 DENND5AQ6IQ26 1287 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 ZFP1Q6P2D0 407 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
LIN54-204ENST00000505397 PACSIN3Q9UKS6 424 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 ACOT9Q9Y305 439 aa17.11■□□□□ 0.33
LIN54-204ENST00000505397 CLGNO14967 610 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 CCL5P13501 91 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 XRCC1P18887 633 aaPredicted RBP17.1■□□□□ 0.33
LIN54-204ENST00000505397 CCNCP24863 283 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 ARNTP27540 789 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 RAB10P61026 200 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 SCN5AQ14524 2016 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 SLC39A12Q504Y0 691 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 SLC41A1Q8IVJ1 513 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 CEP97Q8IW35 865 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 KDM1BQ8NB78 822 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 EDEM1Q92611 657 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 NUP205Q92621 2012 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 RCN3Q96D15 328 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 CELF6Q96J87 481 aaKnown RBP17.1■□□□□ 0.33
LIN54-204ENST00000505397 FCRL5Q96RD9 977 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 OSBPL2Q9H1P3 480 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 XPR1Q9UBH6 696 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 RIMS3Q9UJD0 308 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 OGDHLQ9ULD0 1010 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 CAPN8A6NHC0 703 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 HOXA2O43364 376 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 DPP6P42658 865 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 ATN1P54259 1190 aaPredicted RBP17.1■□□□□ 0.33
LIN54-204ENST00000505397 COG7P83436 770 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 EIF4EBP2Q13542 120 aaPredicted RBP17.1■□□□□ 0.33
LIN54-204ENST00000505397 CEACAM7Q14002 265 aa17.1■□□□□ 0.33
LIN54-204ENST00000505397 RASIP1Q5U651 963 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms