RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PIP4K2CQ8TBX8 421 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 HCAR2Q8TDS4 363 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 UCMAQ8WVF2 138 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 ARRDC3Q96B67 414 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 LRIG1Q96JA1 1093 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 CAPZA3Q96KX2 299 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 AGAP3Q96P47 875 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 MCCC1Q96RQ3 725 aaPredicted RBP5□□□□□ -1.61
LMNB1-208ENST00000504788 LYSMD1Q96S90 227 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 SEMA3CQ99985 751 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 GBA3Q9H227 469 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 EBF2Q9HAK2 575 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 ARNT2Q9HBZ2 717 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 GLOD4Q9HC38 313 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 NT5MQ9NPB1 228 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 ITM2CQ9NQX7 267 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 HECAQ9UBI9 543 aaPredicted RBP5□□□□□ -1.61
LMNB1-208ENST00000504788 DKK3Q9UBP4 350 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 SEPT3Q9UH03 358 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 SUN2Q9UH99 717 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 SLC25A13Q9UJS0 675 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 HPCAL4Q9UM19 191 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 PCDHGC4Q9Y5F7 938 aa5□□□□□ -1.61
LMNB1-208ENST00000504788 PCDH15Q96QU1 1955 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CFAP54Q96N23 3096 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CFAP69A5D8W1 941 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CCDC188H7C350 402 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 PLK4O00444 970 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 KRIT1O00522 736 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 MTSS1O43312 755 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 OPHN1O60890 802 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 ATG13O75143 517 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 SOCS5O75159 536 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 TMEM63AO94886 807 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 SUN1O94901 812 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 POP4O95707 220 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 TIMP2P16035 220 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 ITIH2P19823 946 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 LHCGRP22888 699 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 PSMA3P25788 255 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 PSMB4P28070 264 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 ECHS1P30084 290 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 SLC8A1P32418 973 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CETN2P41208 172 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 P2RY2P41231 377 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 GRIA1P42261 906 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 PI4KAP42356 2102 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 TPMTP51580 245 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CCR3P51677 355 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 RHOAP61586 193 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 AP1S1P61966 158 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 SNRPD1P62314 119 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CREB5Q02930 508 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 ZBTB16Q05516 673 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 TCF15Q12870 199 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 RALGDSQ12967 914 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CST6Q15828 149 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 FNDC3BQ53EP0 1204 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 TMEM31Q5JXX7 168 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 DARS2Q6PI48 645 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 NUDT18Q6ZVK8 323 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 TRMT11Q7Z4G4 463 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 MMAAQ8IVH4 418 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CDKL3Q8IVW4 592 aaPredicted RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CCDC117Q8IWD4 279 aaPredicted RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 WDFY3Q8IZQ1 3526 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 ATL2Q8NHH9 583 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 CCDC26Q8TAB7 109 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 MAIP1Q8WWC4 291 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 EXOC4Q96A65 974 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 ERLEC1Q96DZ1 483 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 GDAP1L1Q96MZ0 367 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 ZNF641Q96N77 438 aaPredicted RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 HHIPQ96QV1 700 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 TUBGCP5Q96RT8 1024 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 RBM15Q96T37 977 aaKnown RBP eCLIP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 HEPHQ9BQS7 1158 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 WDR83Q9BRX9 315 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 POLR1EQ9GZS1 481 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 SUV39H2Q9H5I1 410 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 FBRSQ9HAH7 460 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 PLAC1Q9HBJ0 212 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 ETNK1Q9HBU6 452 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 PCDH9Q9HC56 1237 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 HOMER3Q9NSC5 361 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 DMGDHQ9UI17 866 aaKnown RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 MBD1Q9UIS9 605 aaPredicted RBP4.99□□□□□ -1.61
LMNB1-208ENST00000504788 GGT7Q9UJ14 662 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 TRHDEQ9UKU6 1024 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 SLCO1B1Q9Y6L6 691 aa4.99□□□□□ -1.61
LMNB1-208ENST00000504788 SDK1Q7Z5N4 2213 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 TMEM131Q92545 1883 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 IGHV1OR15-9A0A0B4J2B8 117 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 A0A0J9YYE9 177 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 A0A0U1RQS6 177 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 TCRBV21S2A2A0A5A6 115 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 C16orf96A6NNT2 1141 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 ANKRD66B4E2M5 251 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 H7C0C1 242 aa4.98□□□□□ -1.61
LMNB1-208ENST00000504788 MID1O15344 667 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms