RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SHEQ5VZ18 495 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 FAM111BQ6SJ93 734 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CREB3L2Q70SY1 520 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 DCXRQ7Z4W1 244 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ANKS1BQ7Z6G8 1248 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 KBTBD8Q8NFY9 601 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 BPIFB1Q8TDL5 484 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 RNF25Q96BH1 459 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 MMS19Q96T76 1030 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 KCNN2Q9H2S1 579 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CUEDC2Q9H467 287 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF408Q9H9D4 720 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 GIMAP2Q9UG22 337 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 NOCTQ9UK39 431 aaKnown RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SORCS3Q9UPU3 1222 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 TRIM49BA6NDI0 452 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 WASHC1A8K0Z3 465 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 WASH3PC4AMC7 463 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 TRIM49D1C9J1S8 452 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ONECUT3O60422 494 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 TTC4O95801 387 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 PSMC3P17980 439 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ACADLP28330 430 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CYP27A1Q02318 531 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 HIC1Q14526 733 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 BEX5Q5H9J7 111 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 WDR73Q6P4I2 378 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 WASH2PQ6VEQ5 465 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 NSMFQ6X4W1 530 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ACAD11Q709F0 780 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 NECAB1Q8N987 351 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 WDR36Q8NI36 951 aaKnown RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 DLG3Q92796 817 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 TRIM51Q9BSJ1 452 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 OPN3Q9H1Y3 402 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 GANQ9H2C0 597 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SIAEQ9HAT2 523 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 RDH8Q9NYR8 311 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 RBM7Q9Y580 266 aaKnown RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 TLL2Q9Y6L7 1015 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 GPR75-ASB3A0A0A6YYF3 556 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 AP1G1O43747 822 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 RSL1D1O76021 490 aaKnown RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 FAM13AO94988 1023 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 TXNDC12O95881 172 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 OLFM2O95897 454 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 STAG3L2P0CL84 134 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SLC2A3P11169 496 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 HNRNPLP14866 589 aaKnown RBP eCLIP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ERV3-1Q14264 604 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ACOX1Q15067 660 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 PRKD1Q15139 912 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CLEC16AQ2KHT3 1053 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 TKFCQ3LXA3 575 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 C10orf120Q5SQS8 335 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 USPL1Q5W0Q7 1092 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 HEATR6Q6AI08 1181 aaKnown RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 KLHDC10Q6PID8 442 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 FKBP9P1Q75LS8 142 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 IQGAP3Q86VI3 1631 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ETNPPLQ8TBG4 499 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 HDAC11Q96DB2 347 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 C18orf8Q96DM3 657 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 MED11Q9P086 117 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ING4Q9UNL4 249 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ASB3Q9Y575 518 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 A0A1W2PPW3 197 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 C1orf196B1AJZ1 125 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 H3BMM5 538 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 PLA2G6O60733 806 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SPDEFO95238 335 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 IL1AP01583 271 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CDK1P06493 297 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 MMP2P08253 660 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 LBPP18428 481 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 UGT1A1P22309 533 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CCNE1P24864 410 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 PDK3Q15120 406 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 GPR68Q15743 365 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CYP2A13Q16696 494 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 PGS1Q32NB8 556 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ATXN7L2Q5T6C5 722 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ATPAF1Q5TC12 328 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 GPR107Q5VW38 600 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 CIAPIN1Q6FI81 312 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 RETSATQ6NUM9 610 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 FBXO46Q6PJ61 603 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 P4HA3Q7Z4N8 544 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 PLEKHM2Q8IWE5 1019 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SLC7A6OSQ96CW6 309 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-204ENST00000504131 BTBD6Q96KE9 485 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SLC4A9Q96Q91 983 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 C19orf43Q9BQ61 176 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 MMP27Q9H306 513 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SMARCAL1Q9NZC9 954 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 SRPK3Q9UPE1 567 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 FLVCR2Q9UPI3 526 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 ERGIC3Q9Y282 383 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 DAGLAQ9Y4D2 1042 aa6.3□□□□□ -1.4
CLCN3-204ENST00000504131 MBD5Q9P267 1494 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms