RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 DUSP16Q9BY84 665 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TMPRSS13Q9BYE2 586 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 MIS12Q9H081 205 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 SLC25A18Q9H1K4 315 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TNKS2Q9H2K2 1166 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 LRRC4Q9HBW1 653 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PREBQ9HCU5 417 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 KLHL11Q9NVR0 708 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 CLIC5Q9NZA1 410 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 LUZP4Q9P127 313 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 GULP1Q9UBP9 304 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 ZC3H7BQ9UGR2 993 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 SEPT3Q9UH03 358 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 APOBEC3BQ9UH17 382 aaKnown RBP3.72□□□□□ -1.81
USP46-205ENST00000504078 KCND3Q9UK17 655 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 TSPAN16Q9UKR8 245 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 SCML1Q9UN30 329 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 SMC3Q9UQE7 1217 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 PCDHGA8Q9Y5G5 932 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 SNX10Q9Y5X0 201 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 SCN8AQ9UQD0 1980 aa3.72□□□□□ -1.81
USP46-205ENST00000504078 LRRK1Q38SD2 2015 aa3.71□□□□□ -1.81
USP46-205ENST00000504078 KNL1Q8NG31 2342 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 PIEZO2Q9H5I5 2752 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 TARSL2A2RTX5 802 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 CLEC18AA5D8T8 446 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ENO4A6NNW6 628 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 B4DGG1 531 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 C10orf142B7Z368 130 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 K7EM74 188 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 M0QYV0 167 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 TIMM44O43615 452 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 MAGEC1O60732 1142 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 TSPAN15O95858 294 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 BMP15O95972 392 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 IGLV3-27P01718 113 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 NR3C1P04150 777 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 GP1BAP07359 652 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ZSCAN22P10073 491 aaPredicted RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 LIFP15018 202 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 TACR2P21452 398 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 GNLYP22749 145 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 GKP32189 559 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 IGFALSP35858 605 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 SLC11A2P49281 568 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 RAD23BP54727 409 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 INHBCP55103 352 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ADKP55263 362 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 DAOAP59103 153 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 PPP3CAQ08209 521 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 LRMPQ12912 555 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 EIF2B5Q13144 721 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 CUL4BQ13620 913 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 MAP7Q14244 749 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 NCAPHQ15003 741 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 E2F5Q15329 346 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ARHGAP44Q17R89 818 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 SWI5Q1ZZU3 235 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 MAP9Q49MG5 647 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 PRR30Q53SZ7 412 aaPredicted RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 MS4A13Q5J8X5 152 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ADGRF1Q5T601 910 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 NUGGCQ68CJ6 796 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 KCTD16Q68DU8 428 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 CXorf57Q6NSI4 855 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 CLEC18BQ6UXF7 455 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ADAMTSL4Q6UY14 1074 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 KYAT3Q6YP21 454 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 CCDC73Q6ZRK6 1079 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 DSG4Q86SJ6 1040 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 VPS36Q86VN1 386 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 PARGQ86W56 976 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 UNC93AQ86WB7 457 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 HORMAD1Q86X24 394 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 PHACTR4Q8IZ21 702 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 UNC5BQ8IZJ1 945 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 CRYBG2Q8N1P7 616 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ARHGAP18Q8N392 663 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ZNF276Q8N554 614 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 SLC4A11Q8NBS3 891 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 CLEC18CQ8NCF0 446 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 KIAA0895Q8NCT3 520 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 RCBTB1Q8NDN9 531 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 C9orf43Q8TAL5 461 aaPredicted RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 DQX1Q8TE96 717 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 FRS2Q8WU20 508 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 SEMA4DQ92854 862 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 USP7Q93009 1102 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 TTC17Q96AE7 1141 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 FAM149B1Q96BN6 582 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 MISP3Q96FF7 219 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 TMX3Q96JJ7 454 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ZSCAN31Q96LW9 406 aaPredicted RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 SPAG5Q96R06 1193 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 USP28Q96RU2 1077 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 IL12RB2Q99665 862 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 IMPG2Q9BZV3 1241 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 TM6SF2Q9BZW4 377 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ZNF768Q9H5H4 540 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 KIAA1586Q9HCI6 787 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms