RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ENPP7Q6UWV6 458 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 LRRC31Q6UY01 552 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 RRAGAQ7L523 313 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 TFAP2DQ7Z6R9 452 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 TP53I13Q8NBR0 393 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 CXorf40AQ8TE69 158 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 TAAR9Q96RI9 348 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 SEMA6CQ9H3T2 930 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 ASNSD1Q9NWL6 643 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 LRIT1Q9P2V4 623 aa16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 FCF1Q9Y324 198 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-210ENST00000503827 CAPN5O15484 640 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 MTSS1O43312 755 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 MMP20O60882 483 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 CCL4P13236 92 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 CMA1P23946 247 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 FKBP3Q00688 224 aaKnown RBP16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 CETN1Q12798 172 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 ZNF783Q6ZMS7 281 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 TMPRSS9Q7Z410 1059 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 PIM3Q86V86 326 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 PLPP6Q8IY26 295 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 ATL2Q8NHH9 583 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 TSG101Q99816 390 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 TM6SF2Q9BZW4 377 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 TKTL2Q9H0I9 626 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 WDCPQ9H6R7 721 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 ATP13A1Q9HD20 1204 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 RCOR1Q9UKL0 485 aa16.02■□□□□ 0.16
PDLIM7-210ENST00000503827 ILVBLA1L0T0 632 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 DRGXA6NNA5 263 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 AREL1O15033 823 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 GRAP2O75791 330 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 ZMPSTE24O75844 475 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 AGFG2O95081 481 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 LETM1O95202 739 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 TNFP01375 233 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 KRT5P13647 590 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 GKP32189 559 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 UGT1A3P35503 534 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 SYKP43405 635 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 SRP54P61011 504 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 ARF5P84085 180 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 GCNT1Q02742 428 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 KLRB1Q12918 225 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 PDCLQ13371 301 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 NFATC4Q14934 902 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 KLHL40Q2TBA0 621 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 LACTB2Q53H82 288 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 EFHC2Q5JST6 749 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 BRMS1LQ5PSV4 323 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 OGFOD3Q6PK18 319 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 TTC7BQ86TV6 843 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 SMYD4Q8IYR2 804 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 CACNA2D3Q8IZS8 1091 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 OR6K2Q8NGY2 324 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 ZNF606Q8WXB4 792 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 ABHD17AQ96GS6 310 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 OSBPL1AQ9BXW6 950 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 MPP6Q9NZW5 540 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 KLQ9UEF7 1012 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 HPSEQ9Y251 543 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 PCDHGA3Q9Y5H0 932 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 ANKRD36A6QL64 1941 aa16.01■□□□□ 0.15
PDLIM7-210ENST00000503827 KRIT1O00522 736 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 HGSO14964 777 aaPredicted RBP16■□□□□ 0.15
PDLIM7-210ENST00000503827 PMM2O15305 246 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 CPNE6O95741 557 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 UGT2B4P06133 528 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 IRF4Q15306 451 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 C14orf28Q4W4Y0 310 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 ARHGEF19Q8IW93 802 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 ZNF683Q8IZ20 524 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 FAM46DQ8NEK8 389 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 ISG20Q96AZ6 181 aaKnown RBP16■□□□□ 0.15
PDLIM7-210ENST00000503827 KLHL32Q96NJ5 620 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 RBM15Q96T37 977 aaKnown RBP eCLIP16■□□□□ 0.15
PDLIM7-210ENST00000503827 RDH14Q9HBH5 336 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 ARHGEF38Q9NXL2 777 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 SNX10Q9Y5X0 201 aa16■□□□□ 0.15
PDLIM7-210ENST00000503827 ARHGEF17Q96PE2 2063 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 PRR19A6NJB7 356 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 THAP12O43422 761 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 NUDT21O43809 227 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 F13A1P00488 732 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 FGF3P11487 239 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 ARSDP51689 593 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 SEPT6Q14141 434 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 HLTFQ14527 1009 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 LRRC14Q15048 493 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 POLD3Q15054 466 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 LRRC73Q5JTD7 316 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 ACBD5Q5T8D3 534 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 FHL5Q5TD97 284 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 TAF8Q7Z7C8 310 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 RCBTB1Q8NDN9 531 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 LMO3Q8TAP4 145 aa15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 APOBEC4Q8WW27 367 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-210ENST00000503827 SLC45A3Q96JT2 553 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms