RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 PYROXD2Q8N2H3 581 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 PAF1Q8N7H5 531 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 DCBLD1Q8N8Z6 715 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 NETO2Q8NC67 525 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 ZNF548Q8NEK5 533 aaPredicted RBP10.88□□□□□ -0.67
SNCA-207ENST00000502987 IFI44Q8TCB0 444 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 MAPK15Q8TD08 544 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 CXorf40AQ8TE69 158 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 RFFLQ8WZ73 363 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 NAF1Q96HR8 494 aaKnown RBP10.88□□□□□ -0.67
SNCA-207ENST00000502987 GDAP1L1Q96MZ0 367 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 LENG8Q96PV6 779 aaPredicted RBP10.88□□□□□ -0.67
SNCA-207ENST00000502987 PCDHB18PQ96TA0 734 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 NCAPGQ9BPX3 1015 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 LMBRD1Q9NUN5 540 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 GGT7Q9UJ14 662 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 DAAM1Q9Y4D1 1078 aa10.88□□□□□ -0.67
SNCA-207ENST00000502987 SIGLEC16A6NMB1 481 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 AQP9O43315 295 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 MMP20O60882 483 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 CSO75390 466 aaKnown RBP10.87□□□□□ -0.67
SNCA-207ENST00000502987 TM7SF2O76062 418 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 TMCC1O94876 653 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 CSF2P04141 144 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 ANP32AP39687 249 aaKnown RBP10.87□□□□□ -0.67
SNCA-207ENST00000502987 C1orf61Q13536 156 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 CDKN3Q16667 212 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 PRRT3Q5FWE3 981 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 CFAP58Q5T655 872 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 MANEALQ5VSG8 457 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 ZCCHC8Q6NZY4 707 aaKnown RBP10.87□□□□□ -0.67
SNCA-207ENST00000502987 CACTIN-AS1Q8N1I8 211 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 C3orf20Q8ND61 904 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 BTN2A2Q8WVV5 523 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 CENPIQ92674 756 aaPredicted RBP10.87□□□□□ -0.67
SNCA-207ENST00000502987 GLMNQ92990 594 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 MCEEQ96PE7 176 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 LGMNQ99538 433 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 AGPAT1Q99943 283 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 WRAP53Q9BUR4 548 aaKnown RBP10.87□□□□□ -0.67
SNCA-207ENST00000502987 C1QTNF7Q9BXJ2 289 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 C1QTNF2Q9BXJ5 285 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 SLC13A1Q9BZW2 595 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 TTYH3Q9C0H2 523 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 CATSPERBQ9H7T0 1116 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 USP29Q9HBJ7 922 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 ANO10Q9NW15 660 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 SPASTQ9UBP0 616 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 DOLKQ9UPQ8 538 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 SIK3Q9Y2K2 1263 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 PCDHB1Q9Y5F3 818 aa10.87□□□□□ -0.67
SNCA-207ENST00000502987 FASNP49327 2511 aaKnown RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 CXorf51AA0A1B0GTR3 108 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 RASA4BC9J798 803 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 CCP110O43303 1012 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 RASA4O43374 803 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 MPOP05164 745 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 GP1BAP07359 652 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 ANXA6P08133 673 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 CCDC172P0C7W6 258 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 GIMD1P0DJR0 217 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 NME1P15531 152 aaKnown RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 ITIH2P19823 946 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 TNFAIP3P21580 790 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 RPIAP49247 311 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 ADKP55263 362 aaKnown RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 YBEYP58557 167 aaPredicted RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 COPS2P61201 443 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 GABREP78334 506 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 PTP4A2Q12974 167 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 NR0B2Q15466 257 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 TBC1D25Q3MII6 688 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 FOXR1Q6PIV2 292 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 CRTC1Q6UUV9 634 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 EFL1Q7Z2Z2 1120 aaKnown RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 PHF13Q86YI8 300 aaPredicted RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 RTL3Q8N8U3 475 aaKnown RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 FAM181AQ8N9Y4 354 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 TTC13Q8NBP0 860 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 DENND6BQ8NEG7 585 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 CASKIN2Q8WXE0 1202 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 NTAN1Q96AB6 310 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 HMCESQ96FZ2 354 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 EXOC2Q96KP1 924 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 FCRL3Q96P31 734 aaPredicted RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 BBC3Q96PG8 261 aaPredicted RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 UBL7Q96S82 380 aaPredicted RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 KLF6Q99612 283 aaPredicted RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 SYNDIG1Q9H7V2 258 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 NPDC1Q9NQX5 325 aaPredicted RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 NCKIPSDQ9NZQ3 722 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 APOBEC3BQ9UH17 382 aaKnown RBP10.86□□□□□ -0.67
SNCA-207ENST00000502987 KLF15Q9UIH9 416 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 RAI2Q9Y5P3 530 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 CSNK1G3Q9Y6M4 447 aa10.86□□□□□ -0.67
SNCA-207ENST00000502987 GCN1Q92616 2671 aaKnown RBP10.85□□□□□ -0.67
SNCA-207ENST00000502987 LGALS16A8MUM7 142 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 TMCO5BA8MYB1 307 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 GOLGA6L22H0YM25 854 aa10.85□□□□□ -0.67
SNCA-207ENST00000502987 MUSKO15146 869 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms