RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 TBC1D3FA6NER0 549 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 A8MXQ7 604 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TBC1D3LB9A6J9 549 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TLR4O00206 839 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 MDM4O15151 490 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 ZNF185O15231 689 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CLIC2O15247 247 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 YKT6O15498 198 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 EFSO43281 561 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 MTSS1O43312 755 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 RAD51CO43502 376 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CEP104O60308 925 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CACNG3O60359 315 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TCEA3O75764 348 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 RNASEH2AO75792 299 aaKnown RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 ZWINTO95229 277 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 GAS8O95995 478 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CST3P01034 146 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 TBC1D3HP0C7X1 549 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 RARAP10276 462 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 DLATP10515 647 aaKnown RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 PFKLP17858 780 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 ACP1P24666 158 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 ATICP31939 592 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 MAN1A1P33908 653 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 PRCPP42785 496 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 MAGEA11P43364 429 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 MARSP56192 900 aaKnown RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 STX17P56962 302 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CAV1Q03135 178 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SPIDRQ14159 915 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CLCA4Q14CN2 919 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 NFIL3Q16649 462 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CDKN3Q16667 212 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 MUM1Q2TAK8 710 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 ACCSLQ4AC99 568 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 HSP90AA4PQ58FG1 418 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 ZNF542PQ5EBM4 170 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 FHL5Q5TD97 284 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TBC1D3GQ6DHY5 549 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TBC1D3CQ6IPX1 549 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 KLC3Q6P597 504 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 NCEH1Q6PIU2 408 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 VSTM1Q6UX27 236 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 RGS9BPQ6ZS82 235 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 INTS8Q75QN2 995 aaKnown RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 TBC1D1Q86TI0 1168 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 IRF2BP1Q8IU81 584 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TBC1D3Q8IZP1 549 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 NUP93Q8N1F7 819 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 GUF1Q8N442 669 aaKnown RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 PIP4P2Q8N4L2 257 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 OR6B3Q8NGW1 331 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 OR2T3Q8NH03 318 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SCAMP5Q8TAC9 235 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 ZNF564Q8TBZ8 553 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 IFI44Q8TCB0 444 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 DDI1Q8WTU0 396 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SNRNP27Q8WVK2 155 aaKnown RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 UBLCP1Q8WVY7 318 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 IFT81Q8WYA0 676 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CTNNBL1Q8WYA6 563 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 PCED1BQ96HM7 432 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SPATA17Q96L03 361 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CEP295NLQ96MC4 621 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 PCMTD1Q96MG8 357 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 CEP63Q96MT8 703 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SLC46A1Q96NT5 459 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SERPINB12Q96P63 405 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 HAPLN3Q96S86 360 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 KRT12Q99456 494 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TXLNGYQ9BZA5 131 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 FOXP3Q9BZS1 431 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 PHACTR1Q9C0D0 580 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CARD9Q9H257 536 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SNX25Q9H3E2 840 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 MTG2Q9H4K7 406 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 ZNF768Q9H5H4 540 aaKnown RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 CAAP1Q9H8G2 361 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CRTAC1Q9NQ79 661 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CYLDQ9NQC7 956 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SAR1AQ9NR31 198 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TMEM30AQ9NV96 361 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 ELOVL2Q9NXB9 296 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 FBXL12Q9NXK8 326 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 TUBA8Q9NY65 449 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 SENP1Q9P0U3 644 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 THAP10Q9P2Z0 257 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 TRIM10Q9UDY6 481 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 LNPEPQ9UIQ6 1025 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 CDH9Q9ULB4 789 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 NOVA2Q9UNW9 492 aaKnown RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 TRAF3IP3Q9Y228 551 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SIK3Q9Y2K2 1263 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 PCDHB11Q9Y5F2 797 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 PCDHGA4Q9Y5G9 962 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 SPTA1P02549 2419 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 NUP210Q8TEM1 1887 aaPredicted RBP5.28□□□□□ -1.56
HTT-202ENST00000502820 PTPRQQ9UMZ3 2332 aa5.28□□□□□ -1.56
HTT-202ENST00000502820 MYH11P35749 1972 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms