RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 A0A0B4J203 849 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TEX13CA0A0J9YWL9 993 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 RNF103-CHMP3A0A140T963 221 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 C2orf78A6NCI8 922 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZSCAN5CA6NGD5 496 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 A8MVJ9 347 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 B5MCH6 92 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 RNF103O00237 685 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 MCF2LO15068 1137 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF185O15231 689 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 RTN2O75298 545 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TPPPO94811 219 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLCO2B1O94956 709 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PENKP01210 267 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 CFIP05156 583 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 GHRP10912 638 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TOP1P11387 765 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 LYL1P12980 280 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 CDH2P19022 906 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 KELP23276 732 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TMOD1P28289 359 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PNPLA4P41247 253 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TXKP42681 527 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 CAMLGP49069 296 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF81P51508 661 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 BMXP51813 675 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PMS2P54278 862 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ADARP55265 1226 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 NME5P56597 212 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 C21orf58P58505 322 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 RAC3P60763 192 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 SCN1BQ07699 218 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 LMAN2Q12907 356 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 RALGDSQ12967 914 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 DUSP8Q13202 625 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TUBB3Q13509 450 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 CAPSQ13938 189 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TXNRD1Q16881 649 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 RABL6Q3YEC7 729 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 COLEC12Q5KU26 742 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PRR31Q5SQ13 230 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 FAM160B1Q5W0V3 765 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 DRICH1Q6PGQ1 229 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 FIP1L1Q6UN15 594 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 KIAA1324Q6UXG2 1013 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 SERPINA13PQ6UXR4 307 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF365Q70YC5 407 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 MARK2Q7KZI7 788 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 GPRIN1Q7Z2K8 1008 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PLEKHH3Q7Z736 793 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 HOOK3Q86VS8 718 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PDSS2Q86YH6 399 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TMEM151BQ8IW70 566 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 HDDC3Q8N4P3 179 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 MB21D1Q8N884 522 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PTGR2Q8N8N7 351 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TXNDC5Q8NBS9 432 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC17A8Q8NDX2 589 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 DENND6BQ8NEG7 585 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TMIEQ8NEW7 156 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 BPIFB1Q8TDL5 484 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 CTNNBL1Q8WYA6 563 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PRCCQ92733 491 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 CORO2AQ92828 525 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZKSCAN4Q969J2 545 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PPP2R3CQ969Q6 453 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 KLHL29Q96CT2 875 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 REXO5Q96IC2 774 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 VPS50Q96JG6 964 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZBTB45Q96K62 511 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 LINC00615Q96LM1 132 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 C5orf34Q96MH7 638 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 NEK1Q96PY6 1258 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 FIZ1Q96SL8 496 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 PAFAH2Q99487 392 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 SPATA25Q9BR10 227 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 NDC1Q9BTX1 674 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 MRI1Q9BV20 369 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 CLPBQ9H078 707 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ABCG8Q9H221 673 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 VPS37BQ9H9H4 285 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 SIRT3Q9NTG7 399 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 TMLHEQ9NVH6 421 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 HOXC10Q9NYD6 342 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 JKAMPQ9P055 326 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 FBXL17Q9UF56 701 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 ADAM29Q9UKF5 820 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 INTS6Q9UL03 887 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 SUFUQ9UMX1 484 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 DRG1Q9Y295 367 aaKnown RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 RPH3AQ9Y2J0 694 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 KCTD3Q9Y597 815 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 QSER1Q2KHR3 1735 aa4.44□□□□□ -1.7
HMGB1P21-201ENST00000502313 LOC105369274A0A096LPK9 316 aa4.44□□□□□ -1.7
HMGB1P21-201ENST00000502313 LOC102723532A0A0G2JNH3 316 aa4.44□□□□□ -1.7
HMGB1P21-201ENST00000502313 GOLGA6L10A0A0M3HER8 536 aa4.44□□□□□ -1.7
HMGB1P21-201ENST00000502313 A0A1W2PQF6 199 aa4.44□□□□□ -1.7
HMGB1P21-201ENST00000502313 CLRN2A0PK11 232 aa4.44□□□□□ -1.7
HMGB1P21-201ENST00000502313 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P21-201ENST00000502313 A8MZ25 164 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms