RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ATG9BQ674R7 924 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 CPLX2Q6PUV4 134 aaKnown RBP3.44□□□□□ -1.86
PSPC1-205ENST00000497722 ATF7IPQ6VMQ6 1270 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 GSTA5Q7RTV2 222 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 CTU1Q7Z7A3 348 aaKnown RBP3.44□□□□□ -1.86
PSPC1-205ENST00000497722 TBC1D26Q86UD7 250 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 ZDHHC23Q8IYP9 409 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 KIAA2013Q8IYS2 634 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 CADM3Q8N126 398 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 IQCF1Q8N6M8 205 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 C11orf65Q8NCR3 313 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 OIT3Q8WWZ8 545 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 ELP4Q96EB1 424 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 MEIS3Q99687 375 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 SLC25A18Q9H1K4 315 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 UNC45AQ9H3U1 944 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 PREBQ9HCU5 417 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 WDR6Q9NNW5 1121 aaKnown RBP3.44□□□□□ -1.86
PSPC1-205ENST00000497722 SNTG1Q9NSN8 517 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 SIRT3Q9NTG7 399 aaPredicted RBP3.44□□□□□ -1.86
PSPC1-205ENST00000497722 SMC4Q9NTJ3 1288 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 SPATS2LQ9NUQ6 558 aaKnown RBP3.44□□□□□ -1.86
PSPC1-205ENST00000497722 FZD10Q9ULW2 581 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 PROCRQ9UNN8 238 aa3.44□□□□□ -1.86
PSPC1-205ENST00000497722 PABPN1LA6NDY0 278 aaKnown RBP3.43□□□□□ -1.86
PSPC1-205ENST00000497722 GAGE10A6NGK3 116 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 FAM90A7PA6NKC0 464 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 FAM90A22PA8MWA6 464 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 FAM90A12PA8MX19 464 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 FAM90A23PA8MXZ1 464 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 EIF3CLB5ME19 914 aaKnown RBP3.43□□□□□ -1.86
PSPC1-205ENST00000497722 VWA5AO00534 786 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 ASAP2O43150 1006 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 URODP06132 367 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 GALTP07902 379 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 ARSBP15848 533 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 ABCD3P28288 659 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 TUBP50607 506 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 LTBQ06643 244 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 GOLGA8DPQ0D2H9 430 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 RPE65Q16518 533 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 BAK1Q16611 211 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 DCAF6Q58WW2 860 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 ZNF766Q5HY98 468 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 DNTTIP2Q5QJE6 756 aaKnown RBP3.43□□□□□ -1.86
PSPC1-205ENST00000497722 INTS11Q5TA45 600 aaKnown RBP3.43□□□□□ -1.86
PSPC1-205ENST00000497722 SLC9C2Q5TAH2 1124 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 SERTAD4-AS1Q5TG53 156 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 FAAH2Q6GMR7 532 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 ACAD10Q6JQN1 1059 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 TMEM81Q6P7N7 255 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 MON1BQ7L1V2 547 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 MAATS1Q7Z4T9 603 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 CPLX4Q7Z7G2 160 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 DCP1BQ8IZD4 617 aaKnown RBP3.43□□□□□ -1.86
PSPC1-205ENST00000497722 TEX19Q8NA77 164 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 ZMIZ2Q8NF64 920 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 BICD2Q8TD16 824 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 UCMAQ8WVF2 138 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 SMARCE1Q969G3 411 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 TMEM18Q96B42 140 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 KLHL29Q96CT2 875 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 ZBTB10Q96DT7 871 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 KLHL15Q96M94 604 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 PPM1MQ96MI6 270 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 YME1L1Q96TA2 773 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 WDR77Q9BQA1 342 aaPredicted RBP3.43□□□□□ -1.86
PSPC1-205ENST00000497722 FUZQ9BT04 418 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 PHF7Q9BWX1 381 aaPredicted RBP3.43□□□□□ -1.86
PSPC1-205ENST00000497722 CDT1Q9H211 546 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 KCND2Q9NZV8 630 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 MPP6Q9NZW5 540 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 KIAA1456Q9P272 454 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 HDAC6Q9UBN7 1215 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 ZNF112Q9UJU3 913 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 FAM96BQ9Y3D0 163 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 CLDN16Q9Y5I7 305 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 INSL5Q9Y5Q6 135 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 CYP46A1Q9Y6A2 500 aa3.43□□□□□ -1.86
PSPC1-205ENST00000497722 TRIP12Q14669 1992 aaPredicted RBP3.43□□□□□ -1.86
PSPC1-205ENST00000497722 A0A1W2PPH5 198 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 OR6C75A6NL08 312 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 LRRC53A6NM62 1247 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 C17orf100A8MU93 164 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 HNRNPCL1O60812 293 aaKnown RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 TACC1O75410 805 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 RTN3O95197 1032 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 MBD4O95243 580 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 SPARCP09486 303 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 ATP1A3P13637 1013 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 PTPN2P17706 415 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 CTPS1P17812 591 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 HARS2P49590 506 aaKnown RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 RARSP54136 660 aaKnown RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 CASP6P55212 293 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 Q0VFX4 171 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 KEAP1Q14145 624 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 HIST2H2ACQ16777 129 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 ZNF667Q5HYK9 610 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 FNBP1LQ5T0N5 605 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms