RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 GRIA1P42261 906 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 CSNK1DP48730 415 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 NPY2RP49146 381 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 DGKGP49619 791 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 NUBP1P53384 320 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 MAXP61244 160 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 ITKQ08881 620 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 RUNX3Q13761 415 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 FASTKD3Q14CZ7 662 aaKnown RBP14.35□□□□□ -0.11
VPS26A-209ENST00000497564 ANGPT1Q15389 498 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 KYNUQ16719 465 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 BBS9Q3SYG4 887 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 DENND2CQ68D51 928 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 NAIF1Q69YI7 327 aaPredicted RBP14.35□□□□□ -0.11
VPS26A-209ENST00000497564 LINGO4Q6UY18 593 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 RANBP10Q6VN20 620 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 ZNF852Q6ZMS4 543 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 AGGF1Q8N302 714 aaeCLIP14.35□□□□□ -0.11
VPS26A-209ENST00000497564 ATOH1Q92858 354 aaPredicted RBP14.35□□□□□ -0.11
VPS26A-209ENST00000497564 PKNOX2Q96KN3 472 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 WDR83Q9BRX9 315 aaKnown RBP14.35□□□□□ -0.11
VPS26A-209ENST00000497564 CEP44Q9C0F1 390 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 ACBD3Q9H3P7 528 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 ARNT2Q9HBZ2 717 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 SLC25A13Q9UJS0 675 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 ZNF106Q9H2Y7 1883 aaKnown RBP14.35□□□□□ -0.11
VPS26A-209ENST00000497564 CKAP5Q14008 2032 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 SDR42E2A6NKP2 422 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 SPECC1L-ADORA2AF8WAN1 911 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 INSIG1O15503 277 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 AVILO75366 819 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 TULP3O75386 442 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 BANF1O75531 89 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 SPAG6O75602 509 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 MT-CO1P00395 513 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 ASLP04424 464 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 SERPINF2P08697 491 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 GSTA2P09210 222 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 CTHP32929 405 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 EIF2DP41214 584 aaKnown RBP14.34□□□□□ -0.11
VPS26A-209ENST00000497564 ELK3P41970 407 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 RGRP47804 291 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 EIF3BP55884 814 aaKnown RBP14.34□□□□□ -0.11
VPS26A-209ENST00000497564 WNT3AP56704 352 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 AP1S1P61966 158 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 CDH17Q12864 832 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 SPARCL1Q14515 664 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 SLC29A2Q14542 456 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 IHHQ14623 411 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 MBLAC2Q68D91 279 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 CCNJLQ8IV13 435 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 MAML2Q8IZL2 1156 aaPredicted RBP14.34□□□□□ -0.11
VPS26A-209ENST00000497564 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 ATP11CQ8NB49 1132 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 FBXO36Q8NEA4 188 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 OR52K1Q8NGK4 314 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 CSGALNACT1Q8TDX6 532 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 PYROXD1Q8WU10 500 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 FAM3CQ92520 227 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 CLDN23Q96B33 292 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 FEM1CQ96JP0 617 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 C9orf72Q96LT7 481 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 ZIM3Q96PE6 472 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 NAT9Q9BTE0 207 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 LRRC4CQ9HCJ2 640 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 UBP1Q9NZI7 540 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 PLAAQ9Y263 795 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 NFS1Q9Y697 457 aa14.34□□□□□ -0.11
VPS26A-209ENST00000497564 GPR179Q6PRD1 2367 aa14.33□□□□□ -0.11
VPS26A-209ENST00000497564 LOC285095A0A1B0GVY8 99 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 SMAD6O43541 496 aaKnown RBP14.33□□□□□ -0.12
VPS26A-209ENST00000497564 PMPCBO75439 489 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 SRPRAP08240 638 aaKnown RBP14.33□□□□□ -0.12
VPS26A-209ENST00000497564 SRCP12931 536 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 POLR2EP19388 210 aaKnown RBP14.33□□□□□ -0.12
VPS26A-209ENST00000497564 MAPK8P45983 427 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 NUMBP49757 651 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 RHOAP61586 193 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 ECT2LQ008S8 904 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 GEN1Q17RS7 908 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 STEAP4Q687X5 459 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 TMEM215Q68D42 235 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 DENND5AQ6IQ26 1287 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 NCEH1Q6PIU2 408 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 ALYREFQ86V81 257 aaKnown RBP14.33□□□□□ -0.12
VPS26A-209ENST00000497564 C12orf40Q86WS4 652 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 ANKMY2Q8IV38 441 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 IGDCC3Q8IVU1 814 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 PLPP6Q8IY26 295 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 PHTF2Q8N3S3 785 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 NAT16Q8N8M0 369 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 EBNA1BP2Q99848 306 aaKnown RBP14.33□□□□□ -0.12
VPS26A-209ENST00000497564 FICDQ9BVA6 458 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 TMEM109Q9BVC6 243 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 FSD1LQ9BXM9 530 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 OSBPL6Q9BZF3 934 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 IL22Q9GZX6 179 aa14.33□□□□□ -0.12
VPS26A-209ENST00000497564 NOD2Q9HC29 1040 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms