RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 HLA-DQA1Q5Y7H0 255 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RAP1GAP2Q684P5 730 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TPGS2Q68CL5 300 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CWF19L1Q69YN2 538 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RFWD3Q6PCD5 774 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RPTNQ6XPR3 784 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 LEKR1Q6ZMV7 388 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RFX8Q6ZV50 586 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TFAP2DQ7Z6R9 452 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ADGRD2Q7Z7M1 963 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CHSY1Q86X52 802 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 DENND1CQ8IV53 801 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 LGI2Q8N0V4 545 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CFAP52Q8N1V2 620 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 PLD5Q8N7P1 536 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ARL14EPQ8N8R7 260 aaPredicted RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 MAB21L3Q8N8X9 362 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 MRPL43Q8N983 215 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CCDC89Q8N998 374 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ATL2Q8NHH9 583 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 UHMK1Q8TAS1 419 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 USP33Q8TEY7 942 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TEKT4Q8WW24 435 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ING5Q8WYH8 240 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ANKRD7Q92527 254 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 WBP2Q969T9 261 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 SPATA17Q96L03 361 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 SERPINB11Q96P15 392 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TGS1Q96RS0 853 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 NCAPGQ9BPX3 1015 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TRIM62Q9BVG3 475 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 SLC12A9Q9BXP2 914 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RNF38Q9H0F5 515 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 RAB17Q9H0T7 212 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 NEUROG2Q9H2A3 272 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 SMOC2Q9H3U7 446 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 WDR6Q9NNW5 1121 aaKnown RBP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 PNPLA8Q9NP80 782 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 TNFRSF12AQ9NP84 129 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 MAN1C1Q9NR34 630 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.89□□□□□ -1.63
CMSS1-209ENST00000497345 MTMR10Q9NXD2 777 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 MPP6Q9NZW5 540 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 OR12D3Q9UGF7 316 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 ANAPC5Q9UJX4 755 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 VANGL2Q9ULK5 521 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 SSX2IPQ9Y2D8 614 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 HS3ST4Q9Y661 456 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 PLXNA3P51805 1871 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 GBF1Q92538 1859 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 CEP350Q5VT06 3117 aa4.89□□□□□ -1.63
CMSS1-209ENST00000497345 PATJQ8NI35 1801 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 TARSL2A2RTX5 802 aaKnown RBP4.88□□□□□ -1.63
CMSS1-209ENST00000497345 OTOL1A6NHN0 477 aaPredicted RBP4.88□□□□□ -1.63
CMSS1-209ENST00000497345 EPOPA6NHQ4 379 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 E9PAM4 449 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 APOC4-APOC2K7ER74 178 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 MFSD11O43934 449 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 CNTN5O94779 1100 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ENDOD1O94919 500 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 GAS8O95995 478 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 APOC2P02655 101 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 H2AFXP16104 143 aaPredicted RBP4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ERCC2P18074 760 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 MCM3P25205 808 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 RPL22P35268 128 aaKnown RBP4.88□□□□□ -1.63
CMSS1-209ENST00000497345 NRIP1P48552 1158 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 LMAN1P49257 510 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 FNTAP49354 379 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ITGA8P53708 1063 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 CREMQ03060 361 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 PPARDQ03181 441 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ITIH3Q06033 890 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 SLC10A2Q12908 348 aaPredicted RBP4.88□□□□□ -1.63
CMSS1-209ENST00000497345 CAMK1Q14012 370 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 DHX34Q14147 1143 aaKnown RBP4.88□□□□□ -1.63
CMSS1-209ENST00000497345 BRD3Q15059 726 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 NOMO1Q15155 1222 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 TEAD2Q15562 447 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 DPYSL2Q16555 572 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 CYP1B1Q16678 543 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 P3H1Q32P28 736 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 PIK3R6Q5UE93 754 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 NCBP2-AS2Q69YL0 99 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ARHGAP36Q6ZRI8 547 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 CCDC149Q6ZUS6 474 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ARCQ7LC44 396 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ITIH5Q86UX2 942 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 TCEAL8Q8IYN2 117 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ELMOD1Q8N336 334 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ALLCQ8N6M5 410 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 NPWQ8N729 165 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 NAT16Q8N8M0 369 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 ATP6V0D2Q8N8Y2 350 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 CCDC110Q8TBZ0 833 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 GRK7Q8WTQ7 553 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 IGSF8Q969P0 613 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 NT5C3BQ969T7 300 aa4.88□□□□□ -1.63
CMSS1-209ENST00000497345 TCEAL4Q96EI5 215 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms